Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 OR56A5-201ENST00000340110 738 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 MIR625-201ENST00000385047 85 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 SNORA11F-201ENST00000408237 128 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 U3.42-201ENST00000408746 214 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 AL353621.1-201ENST00000418219 243 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 AC079780.1-201ENST00000428259 207 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 MTND5P15-201ENST00000434246 349 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 HLA-N-201ENST00000437516 135 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 RPL26P6-201ENST00000440913 438 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 RPL29P29-201ENST00000448725 423 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 MTND4LP30-201ENST00000454092 297 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 AC022493.1-201ENST00000492984 337 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 AC146944.2-203ENST00000502493 354 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 AC093852.1-201ENST00000503587 266 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 AC139495.1-202ENST00000513164 354 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-897P-201ENST00000517135 105 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 AMZ2P1-203ENST00000565833 850 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 CYP4A43P-201ENST00000568156 121 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 AC023575.1-201ENST00000580510 358 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 VN1R91P-201ENST00000594377 169 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 AC025946.2-201ENST00000603398 234 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 AC113403.1-201ENST00000604910 193 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 FP236240.3-201ENST00000623061 327 ntBASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SEC61A2Q9H9S3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-1317P-201ENST00000364582 104 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 AC068538.1-201ENST00000376856 336 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 SNORA36C-201ENST00000384289 132 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 Y_RNA.515-201ENST00000384535 112 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-837P-201ENST00000391056 108 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 HSPD1P21-201ENST00000436541 245 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 RPL39P38-201ENST00000467018 153 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 AC109327.1-201ENST00000471666 403 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 RPS26P15-201ENST00000488067 348 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 RN7SL810P-201ENST00000493031 276 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 AC008716.1-201ENST00000511084 513 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-1023P-201ENST00000516137 106 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 AC004584.2-201ENST00000570407 410 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 ARF4P1-201ENST00000605447 541 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 AC114781.5-201ENST00000615297 108 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 AL353748.2-201ENST00000622148 471 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 AC140479.6-201ENST00000633535 357 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 MAPK10-253ENST00000641010 4072 ntBASIC3.8□□□□□ -1.8
SEC61A2Q9H9S3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 Y_RNA.276-201ENST00000364732 109 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-1074P-201ENST00000383995 104 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 MIR521-1-201ENST00000384902 87 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 EIF4A1P3-201ENST00000411521 244 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 AL049874.1-201ENST00000489560 388 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 AC108145.1-201ENST00000503770 153 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 APOOP4-201ENST00000513530 597 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 SNORD116-26-201ENST00000516006 96 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 AC144568.1-201ENST00000520139 137 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 AC107016.1-201ENST00000550463 337 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 AC068446.3-201ENST00000555285 382 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 AL161713.1-201ENST00000555538 145 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms