Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MIR221-201ENST00000385135 110 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 RNU2-63P-201ENST00000410792 194 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 RPS24P7-201ENST00000416921 246 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 WARS2P1-201ENST00000429678 537 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 TIMM9P1-201ENST00000436122 256 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 PGBD4P3-201ENST00000440731 581 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 BRK1P2-201ENST00000442875 223 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 HIGD1AP2-201ENST00000446367 280 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 RPL7P12-201ENST00000446719 750 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 AC090515.1-201ENST00000465295 476 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 AC008526.1-201ENST00000509149 338 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 RNA5SP200-201ENST00000516360 103 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 AC118273.2-201ENST00000532092 465 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 RPS3AP4-201ENST00000555161 764 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 AC012213.3-201ENST00000577199 777 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 U4atac.1-201ENST00000618345 95 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 AC013470.4-201ENST00000619978 986 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 AC093591.3-201ENST00000634516 308 ntBASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.24□□□□□ -2.05
LRRC40Q9H9A6 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 SNORA48.3-201ENST00000391081 134 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 AL355497.1-201ENST00000406262 551 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 MTND1P23-201ENST00000416931 372 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 ELOCP9-201ENST00000418624 239 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 RPS15AP9-201ENST00000439856 381 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 AC016691.1-201ENST00000441321 413 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 RPL23AP49-201ENST00000492925 468 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 CKS1BP2-201ENST00000497342 240 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 AC104685.1-201ENST00000502445 371 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 AC116655.1-201ENST00000508324 901 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 MIR4672-201ENST00000583126 81 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 KC877982.1-201ENST00000602313 470 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 AC025165.5-201ENST00000602802 578 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 AL358072.1-201ENST00000604156 575 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 AC007363.1-201ENST00000604736 620 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 AC034229.4-201ENST00000607861 441 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 MIR6840-201ENST00000611937 71 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 MIR6134-201ENST00000617606 109 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.23□□□□□ -2.05
LRRC40Q9H9A6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 ZNF658B-202ENST00000615961 3375 ntBASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 Z98749.2-208ENST00000381646 500 ntBASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 BTF3P7-201ENST00000407097 488 ntBASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 MIR1302-8-201ENST00000408342 128 ntBASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 AC078974.1-201ENST00000411597 223 ntBASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 HMGB1P11-201ENST00000413899 637 ntBASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 RAC1P6-201ENST00000423911 575 ntBASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 RNU6-953P-201ENST00000459154 107 ntBASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 AC011005.2-201ENST00000487324 359 ntBASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 ACA59.2-201ENST00000517061 156 ntBASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 LINC00933-203ENST00000559812 219 ntBASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 AC009233.1-201ENST00000616477 371 ntBASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 MIR5739-201ENST00000619803 80 ntBASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 CDC27P3-201ENST00000635418 1910 ntBASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 AC006020.1-201ENST00000420179 1854 ntBASIC2.22□□□□□ -2.05
LRRC40Q9H9A6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 AC131280.1-202ENST00000624067 4211 ntBASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 SNORA16B-201ENST00000364674 135 ntBASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 RNU6-1176P-201ENST00000390955 107 ntBASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 RNU6-817P-201ENST00000391083 104 ntBASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 RPS12P24-201ENST00000412619 387 ntBASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 ELOCP17-201ENST00000414751 326 ntBASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 AL035407.1-201ENST00000429211 571 ntBASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 AC109486.1-201ENST00000486833 374 ntBASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 RNU6-572P-201ENST00000516724 80 ntBASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 AC105185.1-201ENST00000518705 535 ntBASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 AC025755.1-201ENST00000521306 278 ntBASIC2.21□□□□□ -2.06
LRRC40Q9H9A6 CYCSP26-201ENST00000534107 320 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms