Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 SNORA1.3-201ENST00000384676 136 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AL356432.1-201ENST00000405809 419 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 RN7SKP156-201ENST00000410308 342 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 ARF4P2-201ENST00000430209 526 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 NUTF2P7-201ENST00000453086 375 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 RNU7-66P-201ENST00000459469 62 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AL049830.2-201ENST00000480072 201 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AC022493.1-201ENST00000492984 337 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AC103851.1-201ENST00000506833 274 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 MTND3P25-201ENST00000509243 135 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 SCARNA14-201ENST00000516903 136 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AC069113.1-201ENST00000517763 267 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AC026464.5-201ENST00000562497 722 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 MIR4738-201ENST00000579134 87 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AC021646.1-201ENST00000605469 484 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AL121757.2-201ENST00000611223 313 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AL031601.2-202ENST00000622650 282 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 TPTEP1-208ENST00000636884 213 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 FTLP6-201ENST00000355274 422 ntBASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 RNU6-1252P-201ENST00000363054 104 ntBASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 RNU6-217P-201ENST00000384164 104 ntBASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 AL353621.1-201ENST00000418219 243 ntBASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 SNRPEP4-201ENST00000435815 279 ntBASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 RPS29P7-201ENST00000439662 171 ntBASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 MRPL50P4-201ENST00000446432 475 ntBASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 RNU6-864P-201ENST00000516256 108 ntBASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 RAB11AP2-201ENST00000545905 639 ntBASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 AC011602.1-201ENST00000546484 331 ntBASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 SCOCP1-201ENST00000554676 349 ntBASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 AC087499.8-201ENST00000578406 226 ntBASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 MIR6076-201ENST00000617521 113 ntBASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 RMST_7.1-201ENST00000621935 268 ntBASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 AC068724.3-201ENST00000625906 87 ntBASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM54Q9BYV2 RNU6-266P-201ENST00000364225 107 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 RNU6-1303P-201ENST00000364841 107 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 MIR450B-201ENST00000401182 78 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 MTHFD2P2-201ENST00000407725 247 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 SETP5-201ENST00000437270 562 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 AL133162.1-201ENST00000463228 453 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 HMGN1P11-201ENST00000508668 303 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 AC025755.1-201ENST00000521306 278 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 AP000889.2-201ENST00000532684 490 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 AC008011.1-201ENST00000545989 227 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 TRAV37-201ENST00000553906 342 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 HMGB1P14-201ENST00000557424 591 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 LRRC37A5P-203ENST00000580181 585 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 VN1R85P-201ENST00000601587 426 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 FTX_3.1-201ENST00000610451 147 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 AC069234.5-201ENST00000611056 416 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 AC091152.2-201ENST00000591628 2569 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 MTND4P29-201ENST00000503122 1372 ntBASIC3.59□□□□□ -1.83
TRIM54Q9BYV2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
TRIM54Q9BYV2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.59□□□□□ -1.84
TRIM54Q9BYV2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.59□□□□□ -1.84
TRIM54Q9BYV2 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 RNU6-254P-201ENST00000363377 107 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 Y_RNA.126-201ENST00000363382 111 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 RPL21P17-201ENST00000397467 475 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms