Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 Y_RNA.595-201ENST00000410403 105 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 HMGN2P38-201ENST00000423806 265 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 AL592045.1-201ENST00000429867 352 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 AC020550.1-201ENST00000447385 163 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 RNU7-59P-201ENST00000459101 61 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 MTND5P13-201ENST00000513046 1079 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 RNA5SP290-201ENST00000517133 127 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 AC022634.1-201ENST00000520765 532 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 AK6P1-201ENST00000540219 478 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 AC021171.1-201ENST00000603137 706 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 AC009314.1-201ENST00000603871 304 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 AC007349.4-201ENST00000608114 532 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 AL391813.2-201ENST00000609113 322 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 AC006927.4-201ENST00000639187 543 ntBASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.42□□□□□ -2.02
RPAP1Q9BWH6 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 AC092125.1-201ENST00000562568 1995 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 RNU1-17P-201ENST00000363022 152 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 RNU6-433P-201ENST00000363216 104 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 MIR583-201ENST00000384846 75 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 MIR524-201ENST00000385242 87 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 RPL23AP36-201ENST00000413895 458 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 BTF3L4P3-201ENST00000418879 476 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 AC244035.1-201ENST00000430042 390 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 RPL26P9-201ENST00000457466 433 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 AC091951.3-201ENST00000504093 246 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 AC108729.3-201ENST00000513484 108 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 RNU6-927P-201ENST00000516199 100 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 AC105185.1-201ENST00000518705 535 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 DUXAP1-201ENST00000556632 463 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 MTND4P33-201ENST00000556706 766 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 MIR544B-201ENST00000582372 78 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 OR1M4P-201ENST00000589199 287 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 BNIP3P8-201ENST00000597863 560 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 AL136370.1-201ENST00000608166 691 ntBASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RPAP1Q9BWH6 Y_RNA.245-201ENST00000364493 95 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 AL513475.1-201ENST00000406602 315 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 SSR1P2-201ENST00000415208 787 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 ELOCP14-201ENST00000428070 331 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 SNRPEP9-201ENST00000436794 238 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 ELOCP7-201ENST00000439968 331 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 AC013267.1-201ENST00000458227 267 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 AC055855.1-201ENST00000489563 579 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 LTV1P1-201ENST00000510683 1237 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 RNA5SP182-201ENST00000516064 82 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 SCARNA1-201ENST00000517138 166 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 MTCO2P15-201ENST00000532655 656 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 AC093012.1-202ENST00000549403 582 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 AC090616.3-201ENST00000582184 217 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 AC004805.2-201ENST00000605382 482 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 AL139418.1-201ENST00000613613 177 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 AL078595.3-201ENST00000623815 1166 ntBASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.4□□□□□ -2.02
RPAP1Q9BWH6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
RPAP1Q9BWH6 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.4□□□□□ -2.03
RPAP1Q9BWH6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.39□□□□□ -2.03
RPAP1Q9BWH6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RPAP1Q9BWH6 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RPAP1Q9BWH6 RNU6-14P-201ENST00000384630 106 ntBASIC2.39□□□□□ -2.03
RPAP1Q9BWH6 RNA5SP213-201ENST00000391031 106 ntBASIC2.39□□□□□ -2.03
RPAP1Q9BWH6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.39□□□□□ -2.03
RPAP1Q9BWH6 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.39□□□□□ -2.03
RPAP1Q9BWH6 CYCSP49-201ENST00000420810 319 ntBASIC2.39□□□□□ -2.03
RPAP1Q9BWH6 AC010153.1-201ENST00000432862 727 ntBASIC2.39□□□□□ -2.03
RPAP1Q9BWH6 RPS15AP5-201ENST00000436276 388 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms