Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC093422.3-201ENST00000428506 305 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 MOB1AP2-201ENST00000446060 614 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 MTND2P6-201ENST00000455337 1030 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 RPL30P9-201ENST00000465586 330 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 RPS23P4-201ENST00000487908 423 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC0.85□□□□□ -2.27
VPS25Q9BRG1 RNU6-667P-201ENST00000517186 102 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 RNU6-840P-201ENST00000517275 65 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 HSPE1P18-201ENST00000517602 280 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AP002770.2-201ENST00000543613 532 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AL121821.2-201ENST00000556081 394 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AC025918.2-201ENST00000558683 763 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 MIR4295-201ENST00000585286 85 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AC002545.1-201ENST00000592511 181 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AC073544.2-201ENST00000601155 540 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AL390838.2-201ENST00000602394 274 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 CYP2C61P-201ENST00000604072 290 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AC097468.3-201ENST00000607956 456 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AL355472.4-201ENST00000610233 626 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AC004009.2-201ENST00000623016 728 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AC106730.3-201ENST00000624568 641 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 AL159972.1-201ENST00000625150 448 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 HPVC1-201ENST00000629899 1198 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 U6.101-201ENST00000637707 76 ntBASIC0.85□□□□□ -2.27
VPS25Q9BRG1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
VPS25Q9BRG1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
VPS25Q9BRG1 SNORA67.6-201ENST00000391093 99 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AL133475.1-201ENST00000404414 305 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS25Q9BRG1 RPS27P16-201ENST00000425758 201 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AL353706.1-201ENST00000436728 494 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AL135790.2-201ENST00000437701 267 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 RPL7P54-201ENST00000438336 674 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS25Q9BRG1 FAM103A2P-201ENST00000444122 354 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 VN1R10P-201ENST00000447106 875 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS25Q9BRG1 CECR9-201ENST00000453421 199 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS25Q9BRG1 SNORA25.15-201ENST00000516487 89 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 RNU6-528P-201ENST00000516926 100 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 RNA5SP404-201ENST00000517118 132 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 SNORA31.24-201ENST00000517232 57 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AC093519.1-201ENST00000566109 298 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.84□□□□□ -2.27
VPS25Q9BRG1 RPAP2P1-201ENST00000603626 1168 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AL357094.1-201ENST00000603845 844 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AC103810.9-201ENST00000606688 112 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AC012676.2-201ENST00000619258 186 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS25Q9BRG1 AP003485.1-201ENST00000625093 753 ntBASIC0.84□□□□□ -2.27
VPS25Q9BRG1 GMFB-210ENST00000628554 639 ntTSL 4 BASIC0.84□□□□□ -2.27
VPS25Q9BRG1 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
VPS25Q9BRG1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
VPS25Q9BRG1 MTND5P11-201ENST00000511037 1812 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 OR5T3-201ENST00000303059 1023 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 MIR504-201ENST00000385065 83 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 SNORA48.1-201ENST00000390879 135 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 AL356967.1-201ENST00000406305 431 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 MIR1262-201ENST00000408276 93 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 AC092634.2-201ENST00000428146 1010 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 AL139415.2-201ENST00000431968 163 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 MTND2P5-201ENST00000432656 1006 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 AC112771.1-201ENST00000463581 102 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 UBL5P1-201ENST00000507979 193 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 AC117532.1-201ENST00000514638 323 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 RNA5SP182-201ENST00000516064 82 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 RNU6-581P-201ENST00000516214 105 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 AC090115.3-201ENST00000553218 849 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 AC015720.1-201ENST00000565251 277 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 AC002400.1-201ENST00000569310 726 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 BNIP3P27-201ENST00000599991 412 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 AL158211.4-201ENST00000606988 584 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 MIR92B-201ENST00000607575 96 ntBASIC0.83□□□□□ -2.28
VPS25Q9BRG1 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC0.83□□□□□ -2.28
VPS25Q9BRG1 IGHVIII-44-202ENST00000636235 289 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms