Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MTCYBP32-201ENST00000427945 1084 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.99□□□□□ -2.25
AP1S3Q96PC3 AL354941.1-201ENST00000438600 464 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.99□□□□□ -2.25
AP1S3Q96PC3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.99□□□□□ -2.25
AP1S3Q96PC3 KATNBL1P6-201ENST00000453433 915 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 MTND3P4-201ENST00000453537 303 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 RNU7-140P-201ENST00000459546 60 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 AC006512.1-201ENST00000468816 291 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 TRBV12-1-201ENST00000479785 344 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.99□□□□□ -2.25
AP1S3Q96PC3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
AP1S3Q96PC3 CYCSP27-201ENST00000527643 293 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 AC015720.1-201ENST00000565251 277 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 AC233266.2-201ENST00000567067 528 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 RN7SL622P-201ENST00000585292 275 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 AL357094.1-201ENST00000603845 844 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 DUSP12P1-201ENST00000612874 516 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 AC021755.4-201ENST00000616620 456 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 AL512506.2-201ENST00000624472 458 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 AC026634.1-201ENST00000634369 198 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 MIR4275-201ENST00000636486 87 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
AP1S3Q96PC3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
AP1S3Q96PC3 RNU6-839P-201ENST00000363347 108 ntBASIC0.98□□□□□ -2.25
AP1S3Q96PC3 MIR217-201ENST00000384817 110 ntBASIC0.98□□□□□ -2.25
AP1S3Q96PC3 MIR518D-201ENST00000385014 87 ntBASIC0.98□□□□□ -2.25
AP1S3Q96PC3 RNU2-36P-201ENST00000410361 191 ntBASIC0.98□□□□□ -2.25
AP1S3Q96PC3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.98□□□□□ -2.25
AP1S3Q96PC3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.98□□□□□ -2.25
AP1S3Q96PC3 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
AP1S3Q96PC3 AC093801.2-201ENST00000503966 1050 ntBASIC0.98□□□□□ -2.25
AP1S3Q96PC3 AC008837.1-201ENST00000511513 412 ntBASIC0.98□□□□□ -2.25
AP1S3Q96PC3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.98□□□□□ -2.25
AP1S3Q96PC3 AC005832.3-201ENST00000537929 631 ntBASIC0.98□□□□□ -2.25
AP1S3Q96PC3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.98□□□□□ -2.25
AP1S3Q96PC3 MIR4422-201ENST00000581938 83 ntBASIC0.98□□□□□ -2.25
AP1S3Q96PC3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.98□□□□□ -2.25
AP1S3Q96PC3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC0.98□□□□□ -2.25
AP1S3Q96PC3 AL035411.2-201ENST00000604022 421 ntBASIC0.98□□□□□ -2.25
AP1S3Q96PC3 AP005229.2-201ENST00000609980 697 ntBASIC0.98□□□□□ -2.25
AP1S3Q96PC3 MIR6852-201ENST00000621699 66 ntBASIC0.98□□□□□ -2.25
AP1S3Q96PC3 AL159972.1-201ENST00000625150 448 ntBASIC0.98□□□□□ -2.25
AP1S3Q96PC3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
AP1S3Q96PC3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
AP1S3Q96PC3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
AP1S3Q96PC3 RNU6-661P-201ENST00000362409 107 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 Y_RNA.67-201ENST00000362870 100 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 SNORD115-3-201ENST00000363100 82 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 RNU1-57P-201ENST00000384491 166 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 MIR29C-201ENST00000385231 88 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 AL590084.1-201ENST00000407885 387 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 MIR1285-1-201ENST00000408593 84 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 AL451054.2-201ENST00000420896 202 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 PTGES3P4-201ENST00000426243 356 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 AC010153.1-201ENST00000432862 727 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.97□□□□□ -2.25
AP1S3Q96PC3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.97□□□□□ -2.25
AP1S3Q96PC3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.97□□□□□ -2.25
AP1S3Q96PC3 RPL36AP48-201ENST00000485521 314 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 FAM92A1P2-202ENST00000504766 877 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 BOLA3P3-201ENST00000505182 232 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 AC118282.2-201ENST00000508739 374 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC0.97□□□□□ -2.25
AP1S3Q96PC3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.97□□□□□ -2.25
AP1S3Q96PC3 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.97□□□□□ -2.25
AP1S3Q96PC3 COPS8P3-201ENST00000526024 482 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.97□□□□□ -2.25
AP1S3Q96PC3 AC079598.5-201ENST00000547460 117 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 AC104229.1-201ENST00000561364 255 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 AC002545.1-201ENST00000592511 181 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 AC116312.1-201ENST00000606841 314 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 AL158211.4-201ENST00000606988 584 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
AP1S3Q96PC3 U1.36-201ENST00000620684 176 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 AP003476.1-201ENST00000623984 516 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 AL590396.4-201ENST00000636779 956 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 ZNF72P-201ENST00000425869 1908 ntBASIC0.97□□□□□ -2.25
AP1S3Q96PC3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
AP1S3Q96PC3 RNU6-60P-201ENST00000364792 103 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 RNA5SP190-201ENST00000365222 118 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 SNORA22-201ENST00000383907 134 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 SNORA22C-201ENST00000384614 134 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 SNORA26.9-201ENST00000391322 122 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 MTCO3P1-205ENST00000422088 832 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 VN1R42P-201ENST00000424651 344 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC234064.1-201ENST00000436312 247 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 RNFT1P2-201ENST00000443064 757 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.96□□□□□ -2.26
AP1S3Q96PC3 CECR9-201ENST00000453421 199 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC108729.2-201ENST00000476543 840 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC092902.1-201ENST00000486999 259 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AL160314.1-201ENST00000490836 438 ntBASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.96□□□□□ -2.26
AP1S3Q96PC3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms