Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 ELOCP10-201ENST00000440624 327 ntBASIC0.33□□□□□ -2.36
CFAP54Q96N23 PRPS1P1-201ENST00000445305 876 ntBASIC0.33□□□□□ -2.36
CFAP54Q96N23 MTND5P8-201ENST00000449817 1083 ntBASIC0.33□□□□□ -2.36
CFAP54Q96N23 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.33□□□□□ -2.36
CFAP54Q96N23 RNA5SP468-201ENST00000516782 93 ntBASIC0.33□□□□□ -2.36
CFAP54Q96N23 AP006587.4-201ENST00000526053 529 ntBASIC0.33□□□□□ -2.36
CFAP54Q96N23 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.33□□□□□ -2.36
CFAP54Q96N23 ELOCP34-201ENST00000604436 327 ntBASIC0.33□□□□□ -2.36
CFAP54Q96N23 PRR13P7-201ENST00000605538 430 ntBASIC0.33□□□□□ -2.36
CFAP54Q96N23 AC097372.5-201ENST00000623665 376 ntBASIC0.33□□□□□ -2.36
CFAP54Q96N23 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.33□□□□□ -2.36
CFAP54Q96N23 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CFAP54Q96N23 SNX3P1X-201ENST00000414887 175 ntBASIC0.33□□□□□ -2.36
CFAP54Q96N23 AL121578.1-201ENST00000428051 892 ntBASIC0.33□□□□□ -2.36
CFAP54Q96N23 AC087477.1-201ENST00000465747 340 ntBASIC0.33□□□□□ -2.36
CFAP54Q96N23 LLPHP1-201ENST00000603571 367 ntBASIC0.33□□□□□ -2.36
CFAP54Q96N23 AC135507.1-201ENST00000607214 561 ntBASIC0.33□□□□□ -2.36
CFAP54Q96N23 MIR126-201ENST00000362291 85 ntBASIC0.32□□□□□ -2.36
CFAP54Q96N23 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.32□□□□□ -2.36
CFAP54Q96N23 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.32□□□□□ -2.36
CFAP54Q96N23 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
CFAP54Q96N23 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.32□□□□□ -2.36
CFAP54Q96N23 AL355472.4-201ENST00000610233 626 ntBASIC0.32□□□□□ -2.36
CFAP54Q96N23 NDUFB4P7-201ENST00000423198 363 ntBASIC0.32□□□□□ -2.36
CFAP54Q96N23 ELOCP6-201ENST00000429066 328 ntBASIC0.32□□□□□ -2.36
CFAP54Q96N23 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.32□□□□□ -2.36
CFAP54Q96N23 ELOCP12-201ENST00000458706 328 ntBASIC0.32□□□□□ -2.36
CFAP54Q96N23 AC008739.2-201ENST00000597006 317 ntBASIC0.32□□□□□ -2.36
CFAP54Q96N23 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.32□□□□□ -2.36
CFAP54Q96N23 AL606490.4-201ENST00000423117 127 ntBASIC0.32□□□□□ -2.36
CFAP54Q96N23 AC067940.1-201ENST00000458411 300 ntBASIC0.32□□□□□ -2.36
CFAP54Q96N23 AP005902.1-201ENST00000521358 186 ntBASIC0.32□□□□□ -2.36
CFAP54Q96N23 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.32□□□□□ -2.36
CFAP54Q96N23 AC023824.2-201ENST00000566185 400 ntBASIC0.32□□□□□ -2.36
CFAP54Q96N23 AC074051.3-201ENST00000570238 358 ntBASIC0.32□□□□□ -2.36
CFAP54Q96N23 MIR10B-201ENST00000385011 110 ntBASIC0.31□□□□□ -2.36
CFAP54Q96N23 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.31□□□□□ -2.36
CFAP54Q96N23 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.31□□□□□ -2.36
CFAP54Q96N23 AL590705.4-201ENST00000532209 134 ntBASIC0.31□□□□□ -2.36
CFAP54Q96N23 BNIP3P16-201ENST00000589779 534 ntBASIC0.31□□□□□ -2.36
CFAP54Q96N23 SNORA25.8-201ENST00000364831 128 ntBASIC0.31□□□□□ -2.36
CFAP54Q96N23 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.31□□□□□ -2.36
CFAP54Q96N23 MTND4LP13-201ENST00000425022 298 ntBASIC0.31□□□□□ -2.36
CFAP54Q96N23 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CFAP54Q96N23 RNU2-19P-201ENST00000517288 84 ntBASIC0.31□□□□□ -2.36
CFAP54Q96N23 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.31□□□□□ -2.36
CFAP54Q96N23 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.31□□□□□ -2.36
CFAP54Q96N23 AC012254.4-201ENST00000588843 273 ntBASIC0.31□□□□□ -2.36
CFAP54Q96N23 AL669831.4-202ENST00000590817 238 ntBASIC0.31□□□□□ -2.36
CFAP54Q96N23 AP003476.1-201ENST00000623984 516 ntBASIC0.31□□□□□ -2.36
CFAP54Q96N23 SNORA3A-201ENST00000364113 130 ntBASIC0.3□□□□□ -2.36
CFAP54Q96N23 RNU6-1126P-201ENST00000384002 107 ntBASIC0.3□□□□□ -2.36
CFAP54Q96N23 RNU6-45P-201ENST00000384471 107 ntBASIC0.3□□□□□ -2.36
CFAP54Q96N23 AL512604.1-201ENST00000404812 257 ntBASIC0.3□□□□□ -2.36
CFAP54Q96N23 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.3□□□□□ -2.36
CFAP54Q96N23 VN1R81P-201ENST00000602085 372 ntBASIC0.3□□□□□ -2.36
CFAP54Q96N23 AC022079.2-201ENST00000619739 566 ntBASIC0.3□□□□□ -2.36
CFAP54Q96N23 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.3□□□□□ -2.36
CFAP54Q96N23 SNORA31.18-201ENST00000517043 134 ntBASIC0.3□□□□□ -2.36
CFAP54Q96N23 AC093027.1-201ENST00000546698 429 ntBASIC0.3□□□□□ -2.36
CFAP54Q96N23 MIR3117-201ENST00000584034 78 ntBASIC0.3□□□□□ -2.36
CFAP54Q96N23 RSL24D1P11-201ENST00000591045 491 ntBASIC0.3□□□□□ -2.36
CFAP54Q96N23 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.3□□□□□ -2.36
CFAP54Q96N23 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.3□□□□□ -2.36
CFAP54Q96N23 AC145207.9-201ENST00000623802 325 ntBASIC0.3□□□□□ -2.36
CFAP54Q96N23 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.3□□□□□ -2.36
CFAP54Q96N23 RNU6-1263P-201ENST00000384601 106 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 MIR938-201ENST00000401216 83 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 CASP3P1-201ENST00000446037 609 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.29□□□□□ -2.36
CFAP54Q96N23 UBL5P1-201ENST00000507979 193 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 AP005639.2-201ENST00000527592 928 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
CFAP54Q96N23 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CFAP54Q96N23 RNA5SP361-201ENST00000362686 118 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 AC097463.2-201ENST00000421074 142 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 MTND4P6-201ENST00000438297 472 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 CLIC4P1-201ENST00000453177 535 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 AC069277.2-201ENST00000454211 432 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.29□□□□□ -2.36
CFAP54Q96N23 MTCO2P32-201ENST00000514865 403 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.29□□□□□ -2.36
CFAP54Q96N23 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.29□□□□□ -2.36
CFAP54Q96N23 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.29□□□□□ -2.36
CFAP54Q96N23 VN1R82P-201ENST00000601481 356 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 MTCO2P22-201ENST00000603246 681 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 AC007038.2-201ENST00000608095 740 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 MIR6130-201ENST00000619419 109 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 MIR198-201ENST00000637333 62 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.29□□□□□ -2.36
CFAP54Q96N23 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.29□□□□□ -2.36
CFAP54Q96N23 AC241520.1-201ENST00000422654 1099 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 AC134050.1-201ENST00000495088 933 ntBASIC0.29□□□□□ -2.36
CFAP54Q96N23 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.29□□□□□ -2.36
CFAP54Q96N23 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.29□□□□□ -2.36
CFAP54Q96N23 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.29□□□□□ -2.36
CFAP54Q96N23 RNA5SP57-201ENST00000459463 123 ntBASIC0.28□□□□□ -2.36
CFAP54Q96N23 LDHBP3-201ENST00000514909 822 ntBASIC0.28□□□□□ -2.36
CFAP54Q96N23 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.28□□□□□ -2.36
CFAP54Q96N23 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms