Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 AC025034.2-201ENST00000623264 286 ntBASIC4.07□□□□□ -1.76
PHACTR3Q96KR7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
PHACTR3Q96KR7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PHACTR3Q96KR7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
PHACTR3Q96KR7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PHACTR3Q96KR7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AC073325.2-201ENST00000339545 159 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 Y_RNA.67-201ENST00000362870 100 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 RNU6-179P-201ENST00000363350 107 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 Y_RNA.339-201ENST00000365325 102 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 Y_RNA.576-201ENST00000384781 102 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AC110754.1-201ENST00000399740 601 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 RNU4-65P-201ENST00000410473 140 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AF228730.4-201ENST00000421457 183 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 RPS12P18-201ENST00000442381 270 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AC020550.1-201ENST00000447385 163 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 RNU6-1208P-201ENST00000459588 107 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AC117522.3-201ENST00000507974 584 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AC009812.2-201ENST00000517657 457 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AP001804.3-201ENST00000525146 880 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AC007687.1-201ENST00000602704 304 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AL022099.1-201ENST00000604551 712 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AC110741.2-201ENST00000605278 268 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AL022345.1-201ENST00000607292 135 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AL137003.2-201ENST00000606924 2538 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 AC244517.1-201ENST00000606030 2086 ntBASIC4.06□□□□□ -1.76
PHACTR3Q96KR7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 RNU4-66P-201ENST00000365199 138 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 SMIM11P1-201ENST00000369586 178 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 RNU6-837P-201ENST00000391056 108 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 AL138885.1-201ENST00000405921 675 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 AL606923.1-201ENST00000406616 190 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 Z98941.1-201ENST00000407764 100 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 MTCO3P45-201ENST00000443036 613 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 RPL37P4-201ENST00000448908 268 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 Y_RNA.632-201ENST00000459189 102 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 AC004801.2-202ENST00000463559 283 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 AL049873.1-201ENST00000480540 376 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 RNU6-864P-201ENST00000516256 108 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 RNU6-685P-201ENST00000517088 95 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 AC103783.1-201ENST00000520506 373 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 MIR5583-1-201ENST00000580941 59 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 AL031176.1-201ENST00000604554 466 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 AL137843.1-201ENST00000605078 385 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 CTHRC1P1-201ENST00000605383 469 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 SNHG22-203ENST00000617833 660 ntBASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PHACTR3Q96KR7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 Y_RNA.378-201ENST00000365652 113 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 Y_RNA.431-201ENST00000384086 102 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 Y_RNA.530-201ENST00000384587 101 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 RPL5P18-201ENST00000406671 891 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 AL583834.1-201ENST00000406943 343 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 RPL21P24-201ENST00000413752 448 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 OR6C66P-201ENST00000414917 930 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 ARL5AP1-201ENST00000418991 388 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 USP9YP20-201ENST00000419224 558 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 AL451054.2-201ENST00000420896 202 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 AC093106.2-201ENST00000428212 385 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 PRPS1P1-201ENST00000445305 876 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 SNORD108-201ENST00000459332 71 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 HMGN1P10-201ENST00000474557 553 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 RPS29P26-201ENST00000477483 171 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 Vault.1-201ENST00000516474 102 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 AL137161.1-201ENST00000532231 390 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 AC008521.1-201ENST00000587471 187 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 POLR3GP2-201ENST00000588366 668 ntBASIC4.04□□□□□ -1.76
PHACTR3Q96KR7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms