Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 MIR3646-201ENST00000578301 84 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 AP000769.2-201ENST00000602344 396 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 AC074140.1-201ENST00000621617 208 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 AL353748.2-201ENST00000622148 471 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 MIR4496-201ENST00000635896 61 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRCH3Q96II8 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
LRCH3Q96II8 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.55□□□□□ -1.52
LRCH3Q96II8 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRCH3Q96II8 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LRCH3Q96II8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.55□□□□□ -1.52
LRCH3Q96II8 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LRCH3Q96II8 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRCH3Q96II8 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.55□□□□□ -1.52
LRCH3Q96II8 ZNF702P-202ENST00000434269 1966 ntBASIC5.55□□□□□ -1.52
LRCH3Q96II8 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRCH3Q96II8 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
LRCH3Q96II8 SMG1P7-201ENST00000565246 2704 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.54□□□□□ -1.52
LRCH3Q96II8 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRCH3Q96II8 AP005435.3-201ENST00000531260 3198 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 Y_RNA.294-201ENST00000364916 102 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRCH3Q96II8 SNORA66-201ENST00000384792 133 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 MIR129-1-201ENST00000384972 72 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 AC099336.2-201ENST00000422457 254 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.54□□□□□ -1.52
LRCH3Q96II8 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.54□□□□□ -1.52
LRCH3Q96II8 AC099560.2-201ENST00000457554 255 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 AC092798.1-201ENST00000458542 409 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.54□□□□□ -1.52
LRCH3Q96II8 SCARNA8-201ENST00000515924 131 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 SNORD33.1-201ENST00000516213 88 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 RNU6-1007P-201ENST00000516586 107 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 RNU6-453P-201ENST00000516819 85 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 AC023632.4-201ENST00000517783 191 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.54□□□□□ -1.52
LRCH3Q96II8 AC105254.2-201ENST00000603636 436 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 MIR6844-201ENST00000637122 62 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 AL773545.4-201ENST00000637262 310 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 AL513478.4-201ENST00000641636 310 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRCH3Q96II8 AC008555.8-201ENST00000623602 2168 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.54□□□□□ -1.52
LRCH3Q96II8 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRCH3Q96II8 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.54□□□□□ -1.52
LRCH3Q96II8 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRCH3Q96II8 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRCH3Q96II8 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRCH3Q96II8 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRCH3Q96II8 AP000756.2-201ENST00000624168 2567 ntBASIC5.54□□□□□ -1.52
LRCH3Q96II8 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.54□□□□□ -1.52
LRCH3Q96II8 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRCH3Q96II8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.53□□□□□ -1.52
LRCH3Q96II8 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRCH3Q96II8 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
LRCH3Q96II8 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRCH3Q96II8 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LRCH3Q96II8 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LRCH3Q96II8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.53□□□□□ -1.52
LRCH3Q96II8 Y_RNA.116-201ENST00000363292 103 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 Y_RNA.251-201ENST00000364551 99 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 RN7SKP186-201ENST00000365371 303 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 SNORA70F-201ENST00000384142 135 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 RNU1-136P-201ENST00000384181 164 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 Y_RNA.572-201ENST00000384757 98 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 MIR626-201ENST00000385032 94 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 U3.19-201ENST00000390893 196 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRCH3Q96II8 AC008065.1-201ENST00000428525 348 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRCH3Q96II8 AL353748.1-201ENST00000440753 474 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 Y_RNA.651-201ENST00000459380 103 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.53□□□□□ -1.52
LRCH3Q96II8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LRCH3Q96II8 AC018448.1-201ENST00000552843 316 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.53□□□□□ -1.52
LRCH3Q96II8 AL138963.2-201ENST00000605137 226 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.53□□□□□ -1.52
LRCH3Q96II8 AP002826.1-201ENST00000608835 315 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 AC010999.1-201ENST00000611856 324 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.53□□□□□ -1.52
LRCH3Q96II8 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRCH3Q96II8 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LRCH3Q96II8 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LRCH3Q96II8 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
LRCH3Q96II8 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.53□□□□□ -1.52
LRCH3Q96II8 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
LRCH3Q96II8 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRCH3Q96II8 AC134026.1-201ENST00000623249 2239 ntBASIC5.52□□□□□ -1.53
LRCH3Q96II8 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.52□□□□□ -1.53
LRCH3Q96II8 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
LRCH3Q96II8 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.52□□□□□ -1.53
LRCH3Q96II8 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.52□□□□□ -1.53
LRCH3Q96II8 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRCH3Q96II8 BCORP1-203ENST00000513194 5093 ntBASIC5.52□□□□□ -1.53
LRCH3Q96II8 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms