Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 MIR449A-201ENST00000362113 91 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 RNU6-38P-201ENST00000384085 107 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 MIR514A2-201ENST00000385131 88 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 MIR514A3-201ENST00000385132 88 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 RNU6-332P-201ENST00000391193 108 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 AL139039.1-201ENST00000401900 692 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 U3.42-201ENST00000408746 214 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 RNU4-26P-201ENST00000410270 107 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 SRIP2-201ENST00000428470 166 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 RNU6-333P-201ENST00000459117 107 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 RPL7P5-201ENST00000471472 736 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 KC877373.1-201ENST00000479066 408 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 RPL30P5-201ENST00000494923 336 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 AC098799.2-201ENST00000509466 868 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 AL110115.1-201ENST00000614396 364 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 MTND1P37-201ENST00000636562 264 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 AL353746.1-201ENST00000566293 6881 ntBASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM43Q96BQ3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
TRIM43Q96BQ3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 AC090740.1-201ENST00000623193 2262 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 Y_RNA.72-201ENST00000362894 103 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 RNU5E-4P-201ENST00000364931 120 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 RNU1-140P-201ENST00000365040 165 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 MIR301A-201ENST00000385261 86 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 U3.39-201ENST00000408569 239 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 GPM6BP2-201ENST00000432046 144 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 SETP5-201ENST00000437270 562 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 AC098614.3-201ENST00000438957 440 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 GPM6BP1-201ENST00000446387 144 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 MTND5P20-201ENST00000448677 143 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 AL136097.1-201ENST00000456945 913 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 SCARNA18-201ENST00000459004 134 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 AC004801.2-202ENST00000463559 283 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 RPS26P15-201ENST00000488067 348 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 LRRC34P2-201ENST00000514850 553 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 Y_RNA.702-201ENST00000516843 96 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 AC078814.3-201ENST00000553036 491 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 TRAV28-201ENST00000557548 323 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 RNU6-89P-201ENST00000606519 100 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 AC093732.2-201ENST00000607950 274 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 AC009570.1-201ENST00000609599 745 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 AC092794.2-201ENST00000620933 563 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 Z99571.1-201ENST00000636677 394 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 AL732372.2-225ENST00000642124 456 ntBASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM43Q96BQ3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 MFSD8-233ENST00000641482 4860 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 RNA5SP197-201ENST00000363357 119 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 Y_RNA.534-201ENST00000384599 112 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 AP000567.1-201ENST00000406413 156 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 EEF1A1P40-201ENST00000412883 573 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 RPL35AP12-201ENST00000425362 338 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 AC092573.2-201ENST00000434546 243 ntBASIC3.7□□□□□ -1.82
TRIM43Q96BQ3 Z82210.1-201ENST00000440037 231 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms