Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-CQ95604 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HLA-CQ95604 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HLA-CQ95604 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-CQ95604 BCORP1-203ENST00000513194 5093 ntBASIC5.3□□□□□ -1.56
HLA-CQ95604 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-CQ95604 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HLA-CQ95604 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-CQ95604 Y_RNA.127-201ENST00000363386 109 ntBASIC5.3□□□□□ -1.56
HLA-CQ95604 SNORA70F-201ENST00000384142 135 ntBASIC5.3□□□□□ -1.56
HLA-CQ95604 MIR129-1-201ENST00000384972 72 ntBASIC5.3□□□□□ -1.56
HLA-CQ95604 AURKAPS2-201ENST00000454983 333 ntBASIC5.3□□□□□ -1.56
HLA-CQ95604 RPS4XP22-201ENST00000480755 780 ntBASIC5.3□□□□□ -1.56
HLA-CQ95604 RPS27P26-201ENST00000494583 239 ntBASIC5.3□□□□□ -1.56
HLA-CQ95604 RNU7-121P-201ENST00000516604 62 ntBASIC5.3□□□□□ -1.56
HLA-CQ95604 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-CQ95604 AC010999.1-201ENST00000611856 324 ntBASIC5.3□□□□□ -1.56
HLA-CQ95604 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-CQ95604 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-CQ95604 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HLA-CQ95604 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HLA-CQ95604 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-CQ95604 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
HLA-CQ95604 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-CQ95604 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-CQ95604 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
HLA-CQ95604 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-CQ95604 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HLA-CQ95604 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
HLA-CQ95604 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-CQ95604 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
HLA-CQ95604 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-CQ95604 MAPK10-304ENST00000641341 3984 ntBASIC5.29□□□□□ -1.56
HLA-CQ95604 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-CQ95604 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-CQ95604 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-CQ95604 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-CQ95604 RNU6-834P-201ENST00000362367 110 ntBASIC5.29□□□□□ -1.56
HLA-CQ95604 RNU6-942P-201ENST00000363002 107 ntBASIC5.29□□□□□ -1.56
HLA-CQ95604 RNU4-80P-201ENST00000363200 141 ntBASIC5.29□□□□□ -1.56
HLA-CQ95604 RNU6-275P-201ENST00000364910 107 ntBASIC5.29□□□□□ -1.56
HLA-CQ95604 RNU6-376P-201ENST00000384731 106 ntBASIC5.29□□□□□ -1.56
HLA-CQ95604 RN7SKP61-201ENST00000410642 295 ntBASIC5.29□□□□□ -1.56
HLA-CQ95604 EBAG9P1-201ENST00000418955 543 ntBASIC5.29□□□□□ -1.56
HLA-CQ95604 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.29□□□□□ -1.56
HLA-CQ95604 AC109327.1-201ENST00000471666 403 ntBASIC5.29□□□□□ -1.56
HLA-CQ95604 UBE2CP3-201ENST00000502715 450 ntBASIC5.29□□□□□ -1.56
HLA-CQ95604 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-CQ95604 AC091874.1-201ENST00000511402 339 ntBASIC5.29□□□□□ -1.56
HLA-CQ95604 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-CQ95604 AC034229.5-201ENST00000624258 185 ntBASIC5.29□□□□□ -1.56
HLA-CQ95604 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-CQ95604 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-CQ95604 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
HLA-CQ95604 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
HLA-CQ95604 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-CQ95604 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-CQ95604 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
HLA-CQ95604 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HLA-CQ95604 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-CQ95604 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-CQ95604 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.28□□□□□ -1.56
HLA-CQ95604 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-CQ95604 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-CQ95604 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-CQ95604 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-CQ95604 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 AC008568.2-201ENST00000623862 2313 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
HLA-CQ95604 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
HLA-CQ95604 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-CQ95604 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-CQ95604 Y_RNA.182-201ENST00000363880 111 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 RNU6-151P-201ENST00000364158 107 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 RNU6-335P-201ENST00000364563 113 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 RNU6-629P-201ENST00000384061 103 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 MIR518D-201ENST00000385014 87 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.28□□□□□ -1.56
HLA-CQ95604 AC074290.1-201ENST00000448883 135 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 RN7SL443P-201ENST00000464331 290 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.28□□□□□ -1.56
HLA-CQ95604 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.28□□□□□ -1.56
HLA-CQ95604 AC020593.1-201ENST00000507399 299 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.28□□□□□ -1.56
HLA-CQ95604 RNU6-1183P-201ENST00000517054 60 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 AC133555.2-201ENST00000550213 292 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.28□□□□□ -1.56
HLA-CQ95604 AC106785.1-201ENST00000565935 262 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.28□□□□□ -1.56
HLA-CQ95604 AL008718.3-201ENST00000610217 321 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 uc_338.7-201ENST00000621834 124 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.28□□□□□ -1.56
HLA-CQ95604 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-CQ95604 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-CQ95604 AC100821.1-201ENST00000523153 2479 ntBASIC5.28□□□□□ -1.56
HLA-CQ95604 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HLA-CQ95604 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HLA-CQ95604 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-CQ95604 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms