Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.59□□□□□ -1.99
PTP4A1Q93096 MED13P1-201ENST00000428342 171 ntBASIC2.59□□□□□ -1.99
PTP4A1Q93096 AC090525.1-201ENST00000479116 478 ntBASIC2.59□□□□□ -1.99
PTP4A1Q93096 AC018437.1-201ENST00000492214 406 ntBASIC2.59□□□□□ -1.99
PTP4A1Q93096 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.59□□□□□ -1.99
PTP4A1Q93096 MRPS33P3-201ENST00000513456 322 ntBASIC2.59□□□□□ -1.99
PTP4A1Q93096 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.59□□□□□ -1.99
PTP4A1Q93096 FABP5P5-201ENST00000515537 406 ntBASIC2.59□□□□□ -1.99
PTP4A1Q93096 SNORA31.15-201ENST00000516771 132 ntBASIC2.59□□□□□ -1.99
PTP4A1Q93096 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.59□□□□□ -1.99
PTP4A1Q93096 OR5AQ1P-201ENST00000527596 927 ntBASIC2.59□□□□□ -1.99
PTP4A1Q93096 FAM92A1P1-201ENST00000528023 890 ntBASIC2.59□□□□□ -1.99
PTP4A1Q93096 AC107016.2-201ENST00000547968 190 ntBASIC2.59□□□□□ -1.99
PTP4A1Q93096 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.59□□□□□ -1.99
PTP4A1Q93096 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.59□□□□□ -1.99
PTP4A1Q93096 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.59□□□□□ -1.99
PTP4A1Q93096 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.59□□□□□ -1.99
PTP4A1Q93096 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
PTP4A1Q93096 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.59□□□□□ -1.99
PTP4A1Q93096 AL645944.1-201ENST00000603857 493 ntBASIC2.59□□□□□ -1.99
PTP4A1Q93096 AL022161.1-201ENST00000604390 213 ntBASIC2.59□□□□□ -1.99
PTP4A1Q93096 AL158032.1-201ENST00000605401 106 ntBASIC2.59□□□□□ -1.99
PTP4A1Q93096 AC087045.1-201ENST00000605856 382 ntBASIC2.59□□□□□ -1.99
PTP4A1Q93096 AC096772.1-201ENST00000609146 564 ntBASIC2.59□□□□□ -1.99
PTP4A1Q93096 FO624990.1-201ENST00000636373 85 ntBASIC2.59□□□□□ -1.99
PTP4A1Q93096 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
PTP4A1Q93096 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.59□□□□□ -2
PTP4A1Q93096 Z75746.1-201ENST00000440243 2080 ntBASIC2.59□□□□□ -2
PTP4A1Q93096 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.59□□□□□ -2
PTP4A1Q93096 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.59□□□□□ -2
PTP4A1Q93096 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
PTP4A1Q93096 OR5J1P-201ENST00000313544 939 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 MIR422A-201ENST00000362286 90 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 MIR208A-201ENST00000362287 71 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 RNU6-553P-201ENST00000364047 96 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 Z98749.2-208ENST00000381646 500 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 MIR512-1-201ENST00000384913 84 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
PTP4A1Q93096 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.58□□□□□ -2
PTP4A1Q93096 RPL23AP32-201ENST00000395315 459 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 UBE2V1P2-201ENST00000397758 440 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 UBA52P6-201ENST00000399822 382 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 AL138885.1-201ENST00000405921 675 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.58□□□□□ -2
PTP4A1Q93096 AC092809.3-201ENST00000415453 231 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.58□□□□□ -2
PTP4A1Q93096 CYCSP48-201ENST00000417124 323 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 AL353621.1-201ENST00000418219 243 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.58□□□□□ -2
PTP4A1Q93096 AC006946.1-201ENST00000429106 328 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 AC022018.1-201ENST00000430685 241 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.58□□□□□ -2
PTP4A1Q93096 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.58□□□□□ -2
PTP4A1Q93096 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.58□□□□□ -2
PTP4A1Q93096 RPL7P12-201ENST00000446719 750 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 AL671855.1-201ENST00000446875 1203 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.58□□□□□ -2
PTP4A1Q93096 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.58□□□□□ -2
PTP4A1Q93096 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.58□□□□□ -2
PTP4A1Q93096 AP000852.1-201ENST00000472460 573 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 RN7SL297P-201ENST00000483161 293 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 AC096576.1-201ENST00000489014 359 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 CKS1BP2-201ENST00000497342 240 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.58□□□□□ -2
PTP4A1Q93096 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.58□□□□□ -2
PTP4A1Q93096 AP005902.1-201ENST00000521358 186 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.58□□□□□ -2
PTP4A1Q93096 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.58□□□□□ -2
PTP4A1Q93096 AL133241.1-201ENST00000556832 487 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.58□□□□□ -2
PTP4A1Q93096 BNIP3P8-201ENST00000597863 560 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.58□□□□□ -2
PTP4A1Q93096 AL670379.10-201ENST00000604330 253 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 AL670379.9-201ENST00000605428 253 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 AL442067.2-201ENST00000614033 363 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.58□□□□□ -2
PTP4A1Q93096 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.58□□□□□ -2
PTP4A1Q93096 AC000403.1-201ENST00000613696 3585 ntBASIC2.58□□□□□ -2
PTP4A1Q93096 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
PTP4A1Q93096 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.57□□□□□ -2
PTP4A1Q93096 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
PTP4A1Q93096 GNG5P1-201ENST00000255500 204 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 MIR412-201ENST00000362142 91 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 RNA5SP393-201ENST00000363423 117 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 SNORA67.1-201ENST00000364749 141 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.57□□□□□ -2
PTP4A1Q93096 RNU6-641P-201ENST00000384006 107 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 RNU6-166P-201ENST00000384371 107 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 MIR558-201ENST00000384920 94 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 RPS3AP36-201ENST00000398190 775 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.57□□□□□ -2
PTP4A1Q93096 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.57□□□□□ -2
PTP4A1Q93096 UBE2D3P1-201ENST00000436669 444 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 AC004383.1-201ENST00000438135 289 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.57□□□□□ -2
PTP4A1Q93096 EPS15P1-201ENST00000448836 336 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.57□□□□□ -2
PTP4A1Q93096 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.57□□□□□ -2
PTP4A1Q93096 KATNBL1P6-201ENST00000453433 915 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms