Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 RPL21P103-201ENST00000479921 488 ntBASIC4.72□□□□□ -1.65
SMARCC1Q92922 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.72□□□□□ -1.65
SMARCC1Q92922 RNU2-69P-201ENST00000516061 100 ntBASIC4.72□□□□□ -1.65
SMARCC1Q92922 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.72□□□□□ -1.65
SMARCC1Q92922 RNU6-323P-201ENST00000521915 107 ntBASIC4.72□□□□□ -1.65
SMARCC1Q92922 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SMARCC1Q92922 DNAJC8P1-201ENST00000554535 372 ntBASIC4.72□□□□□ -1.65
SMARCC1Q92922 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.72□□□□□ -1.65
SMARCC1Q92922 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.72□□□□□ -1.65
SMARCC1Q92922 CYP2C61P-201ENST00000604072 290 ntBASIC4.72□□□□□ -1.65
SMARCC1Q92922 AL157817.1-201ENST00000614264 790 ntBASIC4.72□□□□□ -1.65
SMARCC1Q92922 MIR6128-201ENST00000615528 109 ntBASIC4.72□□□□□ -1.65
SMARCC1Q92922 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SMARCC1Q92922 AC008121.3-201ENST00000618726 433 ntBASIC4.72□□□□□ -1.65
SMARCC1Q92922 MIR8057-201ENST00000620957 69 ntBASIC4.72□□□□□ -1.65
SMARCC1Q92922 uc_338.22-201ENST00000622722 187 ntBASIC4.72□□□□□ -1.65
SMARCC1Q92922 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
SMARCC1Q92922 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SMARCC1Q92922 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SMARCC1Q92922 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SMARCC1Q92922 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
SMARCC1Q92922 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SMARCC1Q92922 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SMARCC1Q92922 HSPA8P4-201ENST00000511877 1920 ntBASIC4.72□□□□□ -1.65
SMARCC1Q92922 MTND5P10-201ENST00000603719 1809 ntBASIC4.72□□□□□ -1.65
SMARCC1Q92922 RNU6-562P-201ENST00000362731 107 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 Y_RNA.145-201ENST00000363527 102 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 Y_RNA.395-201ENST00000383945 109 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 AL583834.1-201ENST00000406943 343 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 PMCHL1-202ENST00000423102 261 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 AF228730.2-201ENST00000438784 848 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.71□□□□□ -1.66
SMARCC1Q92922 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.71□□□□□ -1.66
SMARCC1Q92922 AC117503.1-201ENST00000472241 394 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 RPL31P61-201ENST00000496160 376 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.71□□□□□ -1.66
SMARCC1Q92922 SNORA14.1-201ENST00000516113 141 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 RNA5SP208-201ENST00000516156 78 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.71□□□□□ -1.66
SMARCC1Q92922 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.71□□□□□ -1.66
SMARCC1Q92922 AC090877.1-201ENST00000561418 344 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 MIR4298-201ENST00000584380 73 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 FAM157A-202ENST00000615155 405 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 AC133104.2-201ENST00000615272 193 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 ATP5A1P2-202ENST00000616464 443 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 AC010378.1-201ENST00000619270 362 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 AC103858.2-201ENST00000621471 543 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 SCARNA15.3-201ENST00000626315 122 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 SCARNA4.1-201ENST00000628597 123 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SMARCC1Q92922 MFSD8-236ENST00000641509 4050 ntBASIC4.71□□□□□ -1.66
SMARCC1Q92922 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SMARCC1Q92922 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
SMARCC1Q92922 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SMARCC1Q92922 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SMARCC1Q92922 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SMARCC1Q92922 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SMARCC1Q92922 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SMARCC1Q92922 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.7□□□□□ -1.66
SMARCC1Q92922 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SMARCC1Q92922 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SMARCC1Q92922 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SMARCC1Q92922 U3.19-201ENST00000390893 196 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 AL139397.2-201ENST00000404529 772 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.7□□□□□ -1.66
SMARCC1Q92922 RNU6-954P-201ENST00000411355 107 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.7□□□□□ -1.66
SMARCC1Q92922 AC113618.1-201ENST00000416747 285 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 RPL7P10-201ENST00000417407 739 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.7□□□□□ -1.66
SMARCC1Q92922 AC005300.1-201ENST00000428401 373 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 AL669831.1-202ENST00000428504 417 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.7□□□□□ -1.66
SMARCC1Q92922 SNAP23P1-201ENST00000433229 246 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 AL591212.2-201ENST00000433923 257 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.7□□□□□ -1.66
SMARCC1Q92922 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.7□□□□□ -1.66
SMARCC1Q92922 HMGB3P22-202ENST00000451823 572 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 SNORD108-201ENST00000459332 71 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SMARCC1Q92922 AC025554.1-201ENST00000505641 188 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 SMURF2P1-201ENST00000514992 481 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.7□□□□□ -1.66
SMARCC1Q92922 RNU6-1046P-201ENST00000516538 107 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.7□□□□□ -1.66
SMARCC1Q92922 AC005951.2-201ENST00000576282 495 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 AC025946.2-201ENST00000603398 234 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 AC136443.5-201ENST00000603741 370 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 AL669831.3-213ENST00000636676 183 ntBASIC4.7□□□□□ -1.66
SMARCC1Q92922 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SMARCC1Q92922 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SMARCC1Q92922 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.7□□□□□ -1.66
SMARCC1Q92922 MTND4P1-201ENST00000457501 1466 ntBASIC4.69□□□□□ -1.66
SMARCC1Q92922 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SMARCC1Q92922 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.69□□□□□ -1.66
SMARCC1Q92922 RNU6-14P-201ENST00000384630 106 ntBASIC4.69□□□□□ -1.66
SMARCC1Q92922 RNU6-310P-201ENST00000384655 107 ntBASIC4.69□□□□□ -1.66
SMARCC1Q92922 MIR128-1-201ENST00000384921 82 ntBASIC4.69□□□□□ -1.66
SMARCC1Q92922 AL360182.1-201ENST00000397433 468 ntBASIC4.69□□□□□ -1.66
SMARCC1Q92922 AL590632.1-201ENST00000424289 371 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms