Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 CEACAMP4-201ENST00000457676 421 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 RPS4XP2-201ENST00000458402 793 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 CENPBD1P1-201ENST00000464061 469 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 AP001086.1-201ENST00000494882 321 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 CCDC34P1-201ENST00000507441 517 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 RBBP4P6-201ENST00000508098 202 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 RNU6-840P-201ENST00000517275 65 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.3□□□□□ -1.72
RTF1Q92541 AC093027.1-201ENST00000546698 429 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.3□□□□□ -1.72
RTF1Q92541 AC012182.1-201ENST00000570133 895 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 uc_338.1-201ENST00000612113 180 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 AC135507.2-201ENST00000612443 309 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 SNORD39.4-201ENST00000620099 78 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 AC090574.1-201ENST00000623186 233 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 AP003400.5-201ENST00000624827 617 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 MIR1302-1-201ENST00000637932 143 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 AC004925.1-201ENST00000624256 2706 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.3□□□□□ -1.72
RTF1Q92541 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTF1Q92541 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.3□□□□□ -1.72
RTF1Q92541 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.3□□□□□ -1.72
RTF1Q92541 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTF1Q92541 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTF1Q92541 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RTF1Q92541 RNU1-70P-201ENST00000362618 164 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 Y_RNA.167-201ENST00000363735 109 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 Y_RNA.378-201ENST00000365652 113 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 RNU6-629P-201ENST00000384061 103 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 AC024082.2-201ENST00000434771 238 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 RPL26P6-201ENST00000440913 438 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.29□□□□□ -1.72
RTF1Q92541 AC115115.1-201ENST00000449927 248 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.29□□□□□ -1.72
RTF1Q92541 AP000873.1-201ENST00000463987 400 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 TRBV1-201ENST00000476502 284 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 RPL7P47-201ENST00000497299 556 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 VN1R104P-201ENST00000505115 1009 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 HMGN1P13-201ENST00000505795 138 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.29□□□□□ -1.72
RTF1Q92541 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.29□□□□□ -1.72
RTF1Q92541 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.29□□□□□ -1.72
RTF1Q92541 AL355375.2-201ENST00000574825 175 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 MIR5004-201ENST00000579078 107 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.29□□□□□ -1.72
RTF1Q92541 BDH2P1-201ENST00000602288 736 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 AL138889.2-201ENST00000603883 242 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 AC104237.2-201ENST00000612456 443 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.29□□□□□ -1.72
RTF1Q92541 PWAR6-201ENST00000552334 4618 ntBASIC4.29□□□□□ -1.72
RTF1Q92541 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTF1Q92541 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTF1Q92541 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTF1Q92541 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTF1Q92541 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.28□□□□□ -1.72
RTF1Q92541 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RTF1Q92541 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RTF1Q92541 SDAD1P2-201ENST00000441308 2028 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.28□□□□□ -1.72
RTF1Q92541 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.28□□□□□ -1.72
RTF1Q92541 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RTF1Q92541 Y_RNA.184-201ENST00000363884 108 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 Y_RNA.414-201ENST00000384011 101 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 SNORA36C-201ENST00000384289 132 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 RNU6-817P-201ENST00000391083 104 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.28□□□□□ -1.72
RTF1Q92541 PPP1R2P5-201ENST00000457256 603 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 AC109925.1-201ENST00000478069 331 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 MTCO3P9-201ENST00000506989 781 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.28□□□□□ -1.72
RTF1Q92541 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.28□□□□□ -1.72
RTF1Q92541 SNORA31.3-201ENST00000516029 96 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 RNU6-123P-201ENST00000516163 102 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 RNU6-677P-201ENST00000516914 101 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 RN7SKP60-201ENST00000516985 239 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 AC026464.5-201ENST00000562497 722 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 MIR5583-1-201ENST00000580941 59 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 BNIP3P25-201ENST00000596023 559 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.28□□□□□ -1.72
RTF1Q92541 AL050343.2-201ENST00000607338 280 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.28□□□□□ -1.72
RTF1Q92541 AL359547.2-201ENST00000615810 418 ntBASIC4.28□□□□□ -1.72
RTF1Q92541 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.28□□□□□ -1.72
RTF1Q92541 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RTF1Q92541 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.28□□□□□ -1.72
RTF1Q92541 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.28□□□□□ -1.72
RTF1Q92541 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RTF1Q92541 AL021368.2-201ENST00000606125 5352 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RTF1Q92541 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.27□□□□□ -1.73
RTF1Q92541 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTF1Q92541 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RTF1Q92541 RNU6-190P-201ENST00000384154 102 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 RNU6-1013P-201ENST00000384180 107 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 RNU6-1127P-201ENST00000384580 107 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 RNU6-14P-201ENST00000384630 106 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 RNU6-328P-201ENST00000390887 106 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 FAT1P1-201ENST00000406588 507 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms