Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.13□□□□□ -1.91
SNED1Q8TER0 AL161734.1-201ENST00000609720 557 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SNED1Q8TER0 AC009159.1-201ENST00000618386 642 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 AP003122.6-201ENST00000623831 495 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 FER-210ENST00000628534 558 ntTSL 5 BASIC3.13□□□□□ -1.91
SNED1Q8TER0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNED1Q8TER0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNED1Q8TER0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.13□□□□□ -1.91
SNED1Q8TER0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SNED1Q8TER0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.12□□□□□ -1.91
SNED1Q8TER0 DEFB109C-201ENST00000382575 264 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 DEFB109B-201ENST00000382656 264 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 RNU6-657P-201ENST00000383904 107 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 RNU6-339P-201ENST00000384310 107 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 Y_RNA.509-201ENST00000384506 99 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.12□□□□□ -1.91
SNED1Q8TER0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.12□□□□□ -1.91
SNED1Q8TER0 AC008850.1-201ENST00000427546 362 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 HMGB3P12-201ENST00000438745 556 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 MTND5P14-201ENST00000441481 1267 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 RPL17P49-201ENST00000443728 411 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 MRPL50P4-201ENST00000446432 475 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 AC079448.1-201ENST00000449377 373 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.12□□□□□ -1.91
SNED1Q8TER0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.12□□□□□ -1.91
SNED1Q8TER0 C1DP4-201ENST00000455429 424 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 AC010301.1-201ENST00000473936 355 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 SNORA31.20-201ENST00000517111 133 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.12□□□□□ -1.91
SNED1Q8TER0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.12□□□□□ -1.91
SNED1Q8TER0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.12□□□□□ -1.91
SNED1Q8TER0 HMGN1P30-201ENST00000589286 268 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 AC005261.5-201ENST00000596280 355 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 AC006254.3-201ENST00000603353 884 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 U4.3-201ENST00000621047 82 ntBASIC3.12□□□□□ -1.91
SNED1Q8TER0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SNED1Q8TER0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SNED1Q8TER0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SNED1Q8TER0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SNED1Q8TER0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.12□□□□□ -1.91
SNED1Q8TER0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SNED1Q8TER0 RPL9P7-201ENST00000330965 580 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 RNU4-73P-201ENST00000363164 141 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 SNORD115.1-201ENST00000391109 76 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 AL359511.1-201ENST00000402970 211 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 RPS20P15-201ENST00000412792 311 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SNED1Q8TER0 SDCBPP3-201ENST00000419629 891 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 AL589872.1-201ENST00000426602 288 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 AC132479.1-201ENST00000449160 144 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 AC022364.2-201ENST00000457963 554 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SNED1Q8TER0 RPS29P25-201ENST00000481709 171 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 MTCO3P44-201ENST00000510977 541 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 SCARNA15.1-201ENST00000516384 125 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 Y_RNA.675-201ENST00000516389 149 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 AP003122.4-201ENST00000530980 758 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 AP000857.1-201ENST00000532151 543 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 AL355836.1-201ENST00000555951 870 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 AL845331.3-202ENST00000562856 261 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 MIR4474-201ENST00000579189 78 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 AC139792.3-201ENST00000623525 224 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 AC112487.2-201ENST00000637950 304 ntBASIC3.11□□□□□ -1.91
SNED1Q8TER0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNED1Q8TER0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNED1Q8TER0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SNED1Q8TER0 RNU6-263P-201ENST00000363811 107 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 Y_RNA.481-201ENST00000384373 102 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 RNU6-769P-201ENST00000384407 104 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 Y_RNA.529-201ENST00000384586 119 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 RN7SKP266-201ENST00000410232 287 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 RNU4-26P-201ENST00000410270 107 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 RNA5SP247-201ENST00000411181 105 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AL359704.1-201ENST00000411586 781 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 EEF1A1P40-201ENST00000412883 573 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 AL356320.1-201ENST00000429616 163 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 ARF4P2-201ENST00000430209 526 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.1□□□□□ -1.91
SNED1Q8TER0 FAM103A2P-201ENST00000444122 354 ntBASIC3.1□□□□□ -1.91
SNED1Q8TER0 RPL23AP20-201ENST00000447965 421 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms