Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC073569.3-201ENST00000619055 682 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 CD24P4-201ENST00000382840 243 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 SNORA8-201ENST00000384574 139 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AL121978.1-201ENST00000402778 359 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AL445687.1-201ENST00000439946 251 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 BOLA3P3-201ENST00000505182 232 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AP003973.1-201ENST00000604639 691 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC080013.4-201ENST00000607624 649 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC104763.3-201ENST00000613765 618 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 RNU6-549P-201ENST00000384433 107 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC009296.1-201ENST00000443146 155 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 LRRC34P2-201ENST00000514850 553 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC233266.2-201ENST00000567067 528 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC112191.3-201ENST00000604371 277 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 BNIP3P4-201ENST00000604946 565 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AP006248.3-201ENST00000623580 594 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC111188.2-201ENST00000529697 1387 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AL356131.1-201ENST00000405826 414 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AL158050.1-201ENST00000416077 457 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 NEFMP1-201ENST00000443423 1006 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC069528.1-202ENST00000482888 637 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC022483.1-201ENST00000514020 567 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC022447.1-201ENST00000515358 464 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 SNORA70.16-201ENST00000516390 95 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AL133241.1-201ENST00000556832 487 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 SNORD39.3-201ENST00000584451 71 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC069545.1-201ENST00000605671 358 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC100814.1-201ENST00000606963 623 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AL158211.4-201ENST00000606988 584 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 MIR6130-201ENST00000619419 109 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AP003399.1-201ENST00000637534 361 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 MIR6759-201ENST00000638110 65 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 RNU6-1083P-201ENST00000384022 107 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 MTCYBP3-201ENST00000445588 1137 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC013828.1-201ENST00000481845 158 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC104057.1-201ENST00000515547 497 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 IGJP1-201ENST00000522682 475 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC084851.1-201ENST00000529105 249 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 MIR4422-201ENST00000581938 83 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC106900.2-201ENST00000604994 317 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC008121.3-201ENST00000618726 433 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 RNU6-1339P-201ENST00000363574 91 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC112771.1-201ENST00000463581 102 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC006199.1-201ENST00000548728 219 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC007375.1-201ENST00000554513 578 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC024257.5-201ENST00000612739 531 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 AC090772.4-201ENST00000623599 362 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 MIR4275-201ENST00000636486 87 ntBASIC0.39□□□□□ -2.35
SYNE1Q8NF91 DEFB108F-201ENST00000344638 222 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 U8.14-201ENST00000390843 143 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 RNU6-1300P-201ENST00000391046 108 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AL445305.1-201ENST00000432577 575 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 RAC1P7-201ENST00000445367 377 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 RNU7-26P-201ENST00000458980 63 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC097493.1-201ENST00000463958 372 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 OR9N1P-202ENST00000494289 481 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC008834.1-201ENST00000511612 175 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC109471.1-201ENST00000511631 612 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 DEFB108D-201ENST00000527787 222 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AL161722.3-201ENST00000605789 2983 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 RNY4P3-201ENST00000365254 95 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms