Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 AC108667.1-201ENST00000428618 249 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 RPL23AP76-201ENST00000441860 458 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 RN7SKP210-201ENST00000459176 261 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 snoU109.1-201ENST00000459339 135 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 AC069528.1-202ENST00000482888 637 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 AC093801.2-201ENST00000503966 1050 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 RNA5SP291-201ENST00000517222 105 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 OR5AL2P-201ENST00000532185 920 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 SNRPGP1-201ENST00000553864 222 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 MIR4498-201ENST00000577599 66 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 VN1R87P-201ENST00000596706 487 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 AL138963.2-201ENST00000605137 226 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 AC068880.4-201ENST00000623082 495 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 RNU6-236P-201ENST00000363886 106 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 SNORA23-201ENST00000365128 182 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AL356421.1-201ENST00000403255 413 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 TPMTP3-201ENST00000411928 735 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AC074117.2-201ENST00000417130 397 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 HMGB1P27-201ENST00000431429 603 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 USP9YP22-201ENST00000438971 294 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AC023790.1-201ENST00000482174 347 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 HMGB1P28-201ENST00000507778 552 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 RNU6-250P-201ENST00000516958 103 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 RNU6-714P-201ENST00000516963 103 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AC104417.1-201ENST00000523974 751 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 CBX3P4-201ENST00000538909 354 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AC233702.2-202ENST00000562547 291 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 MIR4255-201ENST00000579351 72 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 MIR5708-201ENST00000579723 85 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 MIR4765-201ENST00000585007 77 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AC023043.2-201ENST00000589678 1026 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AL121652.1-201ENST00000608851 448 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AC009233.1-201ENST00000616477 371 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AL357080.1-201ENST00000617394 239 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AL445264.1-201ENST00000621719 171 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 AP002791.1-201ENST00000623291 381 ntBASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CCDC112Q8NEF3 CDR1-202ENST00000625883 1485 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 U3.13-201ENST00000364804 214 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 RNU6-359P-201ENST00000365466 108 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 MIR147B-201ENST00000390185 80 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 RNU6-952P-201ENST00000391164 108 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 FGF7P8-201ENST00000402994 292 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AL356432.1-201ENST00000405809 419 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 OR9R1P-201ENST00000412200 877 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AL161449.1-201ENST00000414531 1199 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AL451054.2-201ENST00000420896 202 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 BX510359.4-201ENST00000423750 193 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 BX119904.4-201ENST00000424402 301 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 C1DP1-201ENST00000426049 402 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 FABP5P14-201ENST00000437273 393 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 RNU1-98P-201ENST00000458992 160 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 SNORD13-201ENST00000459299 104 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 MTCYBP16-201ENST00000509187 1129 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AC091965.2-201ENST00000512324 613 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AC117532.1-201ENST00000514638 323 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AC107953.1-201ENST00000522216 297 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AP003497.1-201ENST00000528472 562 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 SLC2A13P1-201ENST00000531560 322 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 HSBP1P1-201ENST00000555205 166 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AC110491.1-201ENST00000562191 2010 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AP001269.3-201ENST00000588718 329 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AC005261.5-201ENST00000596280 355 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AC243960.4-201ENST00000600532 288 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 snoU13.31-201ENST00000607291 104 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AC106052.1-201ENST00000608029 497 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AC024257.5-201ENST00000612739 531 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AL512506.1-201ENST00000613918 449 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AC024581.2-201ENST00000619986 252 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AC109454.4-201ENST00000623411 649 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 AL138713.1-201ENST00000624026 2130 ntBASIC1.7□□□□□ -2.14
CCDC112Q8NEF3 MTND5P30-201ENST00000452896 1731 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms