Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC009712.1-201ENST00000564938 316 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 UBE2L4-201ENST00000587688 464 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 MTCYBP22-201ENST00000603788 447 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 DPPA3P3-201ENST00000603842 430 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 AC068276.1-201ENST00000605793 379 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 AL133445.2-201ENST00000611191 527 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 PART1_2.1-201ENST00000612397 250 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 AL158801.5-201ENST00000623123 465 ntBASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
ZIC4Q8N9L1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 SNORD116-12-201ENST00000384468 92 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 MIR320C1-201ENST00000408566 88 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 RNU2-63P-201ENST00000410792 194 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 RPS24P7-201ENST00000416921 246 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 HMGB3P12-201ENST00000438745 556 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 MTATP6P30-201ENST00000443540 664 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AC010095.1-201ENST00000443543 144 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 FABP5P15-201ENST00000453566 214 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 RNU7-59P-201ENST00000459101 61 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AC005410.1-202ENST00000460347 485 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AF213884.2-201ENST00000510417 903 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AC079395.1-201ENST00000510981 262 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 MRPS33P3-201ENST00000513456 322 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 RNA5SP216-201ENST00000516111 123 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 RNU6-276P-201ENST00000516114 96 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AC010376.1-201ENST00000522101 334 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AC118273.2-201ENST00000532092 465 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 OR11H5P-201ENST00000554039 926 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AC078899.2-201ENST00000595282 212 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AL606834.3-201ENST00000602615 496 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AC021171.1-201ENST00000603137 706 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 AC131235.4-201ENST00000609288 620 ntBASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
ZIC4Q8N9L1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 RNU6-777P-201ENST00000364265 104 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 RNU1-148P-201ENST00000384472 162 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 SUMO2P12-201ENST00000405924 140 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 USP9YP6-201ENST00000413550 854 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 ISCA1P1-201ENST00000426679 387 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AC104651.1-201ENST00000427559 735 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 HMGB1P27-201ENST00000431429 603 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 HMGN2P3-201ENST00000433603 273 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 HMGN2P5-201ENST00000436882 273 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AC004383.1-201ENST00000438135 289 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 GPM6BP3-201ENST00000442797 145 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 EEF1E1P1-201ENST00000446998 430 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AP000542.1-201ENST00000448473 371 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 RN7SL274P-201ENST00000492268 272 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 RPS29P11-201ENST00000496507 171 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AC008526.1-201ENST00000509149 338 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AC107393.1-201ENST00000512403 346 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 RNU6-703P-201ENST00000516946 107 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AC012493.3-201ENST00000604494 112 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AC007038.2-201ENST00000608095 740 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AL121895.2-201ENST00000619558 447 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AC024581.2-201ENST00000619986 252 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AL138955.1-201ENST00000622881 1040 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AC112204.3-201ENST00000623822 332 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 AC116618.1-201ENST00000634617 774 ntBASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ZIC4Q8N9L1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 UBE2L2-201ENST00000254302 429 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AL356292.1-201ENST00000283110 373 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 NACAP2-201ENST00000318548 624 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 SNORA16.1-201ENST00000364597 132 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 Y_RNA.472-201ENST00000384322 102 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 MIR9-3-201ENST00000385084 90 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 SNORA40.18-201ENST00000391200 128 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AL359634.1-202ENST00000404721 284 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 MIR1302-8-201ENST00000408342 128 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AC019070.1-201ENST00000415008 1024 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AC083875.1-201ENST00000419509 405 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AL445685.2-201ENST00000422551 342 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AL121890.1-201ENST00000435457 205 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms