Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SNORD14B-201ENST00000364533 90 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 SNORD15B-201ENST00000384714 146 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 CISD1P1-201ENST00000393907 327 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 CIR1P3-201ENST00000405137 479 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 SNORD88.1-201ENST00000408684 91 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 SYF2P2-201ENST00000417620 583 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC097463.2-201ENST00000421074 142 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC004975.1-201ENST00000428733 208 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC236972.1-201ENST00000433225 199 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AL671855.1-201ENST00000446875 1203 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC022364.2-201ENST00000457963 554 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 RPL7P43-201ENST00000478876 753 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 RPL36AP48-201ENST00000485521 314 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC008526.1-201ENST00000509149 338 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 SNORD27.1-201ENST00000516319 72 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AP001646.1-201ENST00000527936 915 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 OR5B10P-201ENST00000532869 642 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC007834.2-201ENST00000536310 343 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AL158211.1-201ENST00000566763 763 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC137800.2-201ENST00000574375 120 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC009163.5-201ENST00000575421 637 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 MTCO3P13-201ENST00000577757 781 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 MIR5692A1-201ENST00000580523 69 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC098848.2-201ENST00000588023 330 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 U4atac.1-201ENST00000618345 95 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC010338.1-201ENST00000621823 717 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC078883.4-201ENST00000623218 367 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 AC110994.2-201ENST00000635481 492 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 FO624990.1-201ENST00000636373 85 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 Z75746.1-201ENST00000440243 2080 ntBASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.09□□□□□ -2.08
LINC01561Q8N1V8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.08
LINC01561Q8N1V8 AC108206.1-201ENST00000570186 4159 ntBASIC2.09□□□□□ -2.08
LINC01561Q8N1V8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.08
LINC01561Q8N1V8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AC073346.2-201ENST00000624724 2058 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AC006020.1-201ENST00000420179 1854 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 RNA5SP50-201ENST00000363731 107 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 SNORA56-201ENST00000383966 129 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 MIR141-201ENST00000384975 95 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 MIR218-1-201ENST00000384999 110 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AC007064.1-201ENST00000412238 351 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AL031779.1-201ENST00000415663 330 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 MTATP6P16-201ENST00000434543 526 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 GSTA11P-201ENST00000452866 669 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 RPL21P41-201ENST00000459863 264 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 RN7SL385P-201ENST00000468873 276 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 MRPL42P6-201ENST00000486397 371 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 RN7SKP272-201ENST00000516988 232 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 RNU1-104P-201ENST00000517280 175 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AC060788.1-201ENST00000521318 469 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AC107016.2-201ENST00000547968 190 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AL133241.1-201ENST00000556832 487 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AC027176.1-201ENST00000560204 514 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AC012414.6-201ENST00000568241 401 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AC012213.3-201ENST00000577199 777 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 MIR4700-201ENST00000578311 74 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 RPL12P50-201ENST00000603116 116 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AC064872.1-201ENST00000604823 1072 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AL121992.2-201ENST00000606262 256 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 AL355365.1-201ENST00000616480 294 ntBASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC01561Q8N1V8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LINC01561Q8N1V8 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms