Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AL136964.1-201ENST00000622038 2990 ntBASIC4.99□□□□□ -1.61
SIX5Q8N196 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIX5Q8N196 RNU6-1266P-201ENST00000362794 105 ntBASIC4.99□□□□□ -1.61
SIX5Q8N196 RNU6-968P-201ENST00000384076 107 ntBASIC4.99□□□□□ -1.61
SIX5Q8N196 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIX5Q8N196 Y_RNA.602-201ENST00000410535 92 ntBASIC4.99□□□□□ -1.61
SIX5Q8N196 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.99□□□□□ -1.61
SIX5Q8N196 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.99□□□□□ -1.61
SIX5Q8N196 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIX5Q8N196 AC011276.1-201ENST00000469688 323 ntBASIC4.99□□□□□ -1.61
SIX5Q8N196 RN7SL604P-201ENST00000492589 296 ntBASIC4.99□□□□□ -1.61
SIX5Q8N196 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.99□□□□□ -1.61
SIX5Q8N196 SCARNA22-201ENST00000503991 125 ntBASIC4.99□□□□□ -1.61
SIX5Q8N196 AC010265.1-201ENST00000513509 211 ntBASIC4.99□□□□□ -1.61
SIX5Q8N196 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.99□□□□□ -1.61
SIX5Q8N196 VN1R85P-201ENST00000601587 426 ntBASIC4.99□□□□□ -1.61
SIX5Q8N196 AC073657.2-201ENST00000605661 303 ntBASIC4.99□□□□□ -1.61
SIX5Q8N196 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.99□□□□□ -1.61
SIX5Q8N196 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.99□□□□□ -1.61
SIX5Q8N196 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.99□□□□□ -1.61
SIX5Q8N196 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIX5Q8N196 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIX5Q8N196 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.99□□□□□ -1.61
SIX5Q8N196 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIX5Q8N196 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.99□□□□□ -1.61
SIX5Q8N196 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.99□□□□□ -1.61
SIX5Q8N196 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIX5Q8N196 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIX5Q8N196 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.99□□□□□ -1.61
SIX5Q8N196 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.99□□□□□ -1.61
SIX5Q8N196 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SIX5Q8N196 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX5Q8N196 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SIX5Q8N196 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX5Q8N196 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX5Q8N196 OR51H2P-202ENST00000641424 3046 ntBASIC4.98□□□□□ -1.61
SIX5Q8N196 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX5Q8N196 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SIX5Q8N196 RNU6-105P-201ENST00000363909 104 ntBASIC4.98□□□□□ -1.61
SIX5Q8N196 Y_RNA.277-201ENST00000364754 102 ntBASIC4.98□□□□□ -1.61
SIX5Q8N196 U3.30-201ENST00000391308 210 ntBASIC4.98□□□□□ -1.61
SIX5Q8N196 RNA5SP36-201ENST00000410197 133 ntBASIC4.98□□□□□ -1.61
SIX5Q8N196 TBCAP2-201ENST00000416175 326 ntBASIC4.98□□□□□ -1.61
SIX5Q8N196 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.98□□□□□ -1.61
SIX5Q8N196 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.98□□□□□ -1.61
SIX5Q8N196 AL353705.4-201ENST00000449661 238 ntBASIC4.98□□□□□ -1.61
SIX5Q8N196 AL138752.1-201ENST00000452964 351 ntBASIC4.98□□□□□ -1.61
SIX5Q8N196 RNA5SP392-201ENST00000516905 112 ntBASIC4.98□□□□□ -1.61
SIX5Q8N196 AP004607.1-201ENST00000524456 203 ntBASIC4.98□□□□□ -1.61
SIX5Q8N196 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.98□□□□□ -1.61
SIX5Q8N196 AC133555.2-201ENST00000550213 292 ntBASIC4.98□□□□□ -1.61
SIX5Q8N196 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.98□□□□□ -1.61
SIX5Q8N196 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.98□□□□□ -1.61
SIX5Q8N196 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.98□□□□□ -1.61
SIX5Q8N196 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.98□□□□□ -1.61
SIX5Q8N196 AC240442.1-201ENST00000616055 283 ntBASIC4.98□□□□□ -1.61
SIX5Q8N196 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.98□□□□□ -1.61
SIX5Q8N196 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX5Q8N196 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.98□□□□□ -1.61
SIX5Q8N196 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.98□□□□□ -1.61
SIX5Q8N196 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SIX5Q8N196 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SIX5Q8N196 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.98□□□□□ -1.61
SIX5Q8N196 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX5Q8N196 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.97□□□□□ -1.61
SIX5Q8N196 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX5Q8N196 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.97□□□□□ -1.61
SIX5Q8N196 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX5Q8N196 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX5Q8N196 AC063976.2-201ENST00000425667 3556 ntBASIC4.97□□□□□ -1.61
SIX5Q8N196 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SIX5Q8N196 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.97□□□□□ -1.61
SIX5Q8N196 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SIX5Q8N196 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX5Q8N196 SNORA7.2-201ENST00000364446 145 ntBASIC4.97□□□□□ -1.61
SIX5Q8N196 RNA5SP509-201ENST00000364577 119 ntBASIC4.97□□□□□ -1.61
SIX5Q8N196 RNU1-64P-201ENST00000365443 163 ntBASIC4.97□□□□□ -1.61
SIX5Q8N196 AL359837.1-201ENST00000381357 287 ntBASIC4.97□□□□□ -1.61
SIX5Q8N196 MIR134-201ENST00000385258 73 ntBASIC4.97□□□□□ -1.61
SIX5Q8N196 Y_RNA.581-201ENST00000391017 97 ntBASIC4.97□□□□□ -1.61
SIX5Q8N196 AL079342.1-201ENST00000401460 267 ntBASIC4.97□□□□□ -1.61
SIX5Q8N196 U3.37-201ENST00000408528 213 ntBASIC4.97□□□□□ -1.61
SIX5Q8N196 RNU6-1245P-201ENST00000411130 106 ntBASIC4.97□□□□□ -1.61
SIX5Q8N196 AL358453.1-201ENST00000422522 250 ntBASIC4.97□□□□□ -1.61
SIX5Q8N196 U8.22-201ENST00000459141 133 ntBASIC4.97□□□□□ -1.61
SIX5Q8N196 SCARNA24.2-201ENST00000516968 130 ntBASIC4.97□□□□□ -1.61
SIX5Q8N196 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.97□□□□□ -1.61
SIX5Q8N196 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.97□□□□□ -1.61
SIX5Q8N196 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.97□□□□□ -1.61
SIX5Q8N196 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SIX5Q8N196 AC008785.1-201ENST00000624475 456 ntBASIC4.97□□□□□ -1.61
SIX5Q8N196 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SIX5Q8N196 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.97□□□□□ -1.61
SIX5Q8N196 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX5Q8N196 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX5Q8N196 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.97□□□□□ -1.61
SIX5Q8N196 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SIX5Q8N196 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SIX5Q8N196 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SIX5Q8N196 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms