Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC005094.1-201ENST00000440420 368 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AC093392.2-201ENST00000450682 337 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 FABP5P13-201ENST00000452144 328 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 SNRPFP4-201ENST00000456366 242 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 BZW1P2-201ENST00000473537 826 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 RPS3AP22-201ENST00000488297 769 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AL160314.1-201ENST00000490836 438 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AC135721.1-201ENST00000497954 479 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AC087373.1-201ENST00000524920 491 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AC013828.2-201ENST00000532487 235 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AC004486.1-201ENST00000546846 233 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 UBE2L4-201ENST00000587688 464 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AL133393.1-201ENST00000603277 287 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AL158801.5-201ENST00000623123 465 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AC091953.2-201ENST00000623979 160 ntBASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
COL27A1Q8IZC6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 RNU1-105P-201ENST00000363470 161 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 RN7SKP226-201ENST00000364912 300 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 RPS20P2-201ENST00000402520 389 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 MIR1290-201ENST00000408735 78 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 RNA5SP38-201ENST00000410750 119 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 RNU4-72P-201ENST00000410754 173 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 AL365203.2-201ENST00000423444 196 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 RAC1P6-201ENST00000423911 575 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 MTATP6P17-201ENST00000431030 672 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 COX6CP12-201ENST00000446748 202 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 AP000542.1-201ENST00000448473 371 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 AC093899.1-201ENST00000457984 376 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 HMGN2P13-201ENST00000476476 274 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 AC005771.1-201ENST00000585581 349 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 RNU6-87P-201ENST00000607561 108 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 AC090970.3-201ENST00000612566 866 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 AL603758.1-201ENST00000618654 241 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 AC009812.4-201ENST00000569134 1805 ntBASIC1.89□□□□□ -2.11
COL27A1Q8IZC6 AP001486.2-201ENST00000561652 5113 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AC110774.1-201ENST00000623567 2018 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 RNU6-457P-201ENST00000363999 107 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 Y_RNA.226-201ENST00000364337 114 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 Y_RNA.245-201ENST00000364493 95 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AL109755.1-201ENST00000401791 649 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 RNU6-1077P-201ENST00000410506 102 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 RNU6-193P-201ENST00000410977 107 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 MTND3P17-201ENST00000416968 344 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 PPP1R11P2-201ENST00000423543 382 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AL117351.1-201ENST00000438864 766 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 OSTCP8-201ENST00000445117 448 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 GDI2P2-201ENST00000445131 608 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 MTATP6P26-201ENST00000445926 662 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AL033528.1-201ENST00000453780 140 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AC109486.1-201ENST00000486833 374 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AC007182.2-201ENST00000489251 402 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AC117522.2-201ENST00000510049 657 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 RNU6-390P-201ENST00000516259 103 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 RNU6-143P-201ENST00000516942 93 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 RNA5SP402-201ENST00000517148 110 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AC011260.1-201ENST00000578420 472 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 MTCYBP22-201ENST00000603788 447 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 SNRPGP19-201ENST00000603826 189 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 HSPE1P7-201ENST00000604681 321 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AC068276.1-201ENST00000605793 379 ntBASIC1.88□□□□□ -2.11
COL27A1Q8IZC6 AP000254.1-201ENST00000609934 520 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms