Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 RNU6-142P-201ENST00000384019 107 ntBASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 MIR589-201ENST00000385238 99 ntBASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 AL035079.1-201ENST00000405210 287 ntBASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 KC877373.1-201ENST00000479066 408 ntBASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 RN7SL814P-201ENST00000487715 300 ntBASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 BX510359.5-201ENST00000515651 304 ntBASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 DEFB131C-201ENST00000528817 165 ntBASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 AC090616.3-201ENST00000582184 217 ntBASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 AC008873.1-201ENST00000625051 138 ntBASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 SNORA43.4-201ENST00000629559 138 ntBASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 U6.99-201ENST00000637524 83 ntBASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 AC110774.1-201ENST00000623567 2018 ntBASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 OR51H2P-202ENST00000641424 3046 ntBASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC116Q8IYX3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 AL592437.2-201ENST00000421655 2434 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 RN7SKP160-201ENST00000363804 340 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 RNU6-80P-201ENST00000384195 107 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 SNORA20-201ENST00000384662 132 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 MIR513C-201ENST00000401352 84 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 U3.37-201ENST00000408528 213 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 Y_RNA.595-201ENST00000410403 105 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 RNA5SP31-201ENST00000411144 127 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 NDUFB4P7-201ENST00000423198 363 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 AC010095.1-201ENST00000443543 144 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 AC009963.2-201ENST00000453431 138 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 AC006026.2-201ENST00000457376 180 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 RN7SL177P-201ENST00000476596 299 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 RNU6-1198P-201ENST00000516904 67 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 AC016256.1-201ENST00000547971 354 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 RN7SL708P-201ENST00000580952 299 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 MIR6837-201ENST00000620884 64 ntBASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CCDC116Q8IYX3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 AL391516.1-201ENST00000554380 2449 ntBASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 Z73965.1-201ENST00000623412 2297 ntBASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 RNU6-1298P-201ENST00000362456 101 ntBASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 Y_RNA.43-201ENST00000362670 111 ntBASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 RNA5SP90-201ENST00000364801 99 ntBASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 MIR539-201ENST00000365690 78 ntBASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 SNORA67-201ENST00000384423 137 ntBASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 RNU6-1245P-201ENST00000411130 106 ntBASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 AC138623.1-201ENST00000418060 216 ntBASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 AL355433.1-201ENST00000422804 300 ntBASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 AC093840.1-201ENST00000511599 336 ntBASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 Y_RNA.797-201ENST00000515977 94 ntBASIC4.92□□□□□ -1.62
CCDC116Q8IYX3 AP004607.1-201ENST00000524456 203 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms