Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 HMGB3P12-201ENST00000438745 556 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 AC098831.1-201ENST00000440661 216 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 MTND1P30-201ENST00000441241 901 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 KATNBL1P6-201ENST00000453433 915 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 AL139824.2-201ENST00000458731 1095 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 AC026801.1-201ENST00000497178 464 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 SNORA31.15-201ENST00000516771 132 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 NACAP3-201ENST00000552100 481 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 AC145350.1-201ENST00000567426 208 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 AC009163.5-201ENST00000575421 637 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 MIR4435-1-201ENST00000582552 80 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 AL355877.2-201ENST00000603670 358 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 AL355598.1-201ENST00000604169 202 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 AC007363.1-201ENST00000604736 620 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 AC104237.2-201ENST00000612456 443 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 AL160394.1-201ENST00000624765 724 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 AC110491.1-201ENST00000562191 2010 ntBASIC2.78□□□□□ -1.96
CCDC83Q8IWF9 ELF2P3-201ENST00000445099 1506 ntBASIC2.78□□□□□ -1.97
CCDC83Q8IWF9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 OR5H15-201ENST00000383696 930 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 AL049545.1-201ENST00000401856 572 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 AC092447.3-201ENST00000426027 686 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 RPL36AP53-201ENST00000432891 316 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 CR769767.1-201ENST00000436337 346 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 USP9YP12-201ENST00000450481 570 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 RNU6-953P-201ENST00000459154 107 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 AC118465.1-201ENST00000513820 1271 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 RNU4-29P-201ENST00000515943 174 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 RNU6-1092P-201ENST00000516955 87 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 AC022878.1-201ENST00000530684 149 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 AC135628.1-201ENST00000568867 534 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 MIR4446-201ENST00000578505 67 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 AC103810.1-201ENST00000579873 453 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 NIFKP6-201ENST00000598115 845 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 AC104763.2-201ENST00000604179 382 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 AC112191.3-201ENST00000604371 277 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 AC012360.2-201ENST00000609349 391 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 AC013562.2-201ENST00000611632 603 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 MIR1291-201ENST00000627649 87 ntBASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC83Q8IWF9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 MIR449A-201ENST00000362113 91 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 RNU1-138P-201ENST00000384093 164 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 RPS15AP12-201ENST00000419498 388 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 AL356583.2-201ENST00000426536 280 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 RPS6P15-201ENST00000431996 751 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 AL513328.1-201ENST00000446460 224 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 COX6CP12-201ENST00000446748 202 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 MTCO2P29-201ENST00000465212 189 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 RPL39P36-201ENST00000490784 156 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 RPL37P25-201ENST00000507308 276 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 MRPS36P2-201ENST00000512569 299 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 AC114781.4-201ENST00000513707 639 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 DUXAP5-201ENST00000529668 529 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 NRBF2P5-201ENST00000603087 788 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 AC103810.6-201ENST00000606708 136 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 AC046143.2-201ENST00000609789 160 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 AL365204.3-201ENST00000612448 685 ntBASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC83Q8IWF9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CCDC83Q8IWF9 MTND4P4-201ENST00000439033 1366 ntBASIC2.75□□□□□ -1.97
CCDC83Q8IWF9 AC016717.2-201ENST00000609089 5141 ntBASIC2.75□□□□□ -1.97
CCDC83Q8IWF9 HSPE1P11-201ENST00000339579 310 ntBASIC2.75□□□□□ -1.97
CCDC83Q8IWF9 RNU6-960P-201ENST00000364056 120 ntBASIC2.75□□□□□ -1.97
CCDC83Q8IWF9 SMIM11P1-201ENST00000369586 178 ntBASIC2.75□□□□□ -1.97
CCDC83Q8IWF9 AC096649.2-201ENST00000416186 393 ntBASIC2.75□□□□□ -1.97
CCDC83Q8IWF9 AC009963.1-201ENST00000417265 157 ntBASIC2.75□□□□□ -1.97
CCDC83Q8IWF9 AL139413.1-201ENST00000421309 217 ntBASIC2.75□□□□□ -1.97
CCDC83Q8IWF9 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC83Q8IWF9 UBE2D3P4-201ENST00000441973 436 ntBASIC2.75□□□□□ -1.97
CCDC83Q8IWF9 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms