Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC108059.3-201ENST00000456388 214 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 AC109486.1-201ENST00000486833 374 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 AC022493.1-201ENST00000492984 337 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 RNA5SP364-201ENST00000516938 78 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 SCARNA11.3-201ENST00000517276 130 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 MIR3146-201ENST00000580367 79 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 AC007363.1-201ENST00000604736 620 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 AC007938.3-201ENST00000604965 623 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 AC144521.1-201ENST00000607148 956 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 AC090970.3-201ENST00000612566 866 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 AC009831.4-201ENST00000620744 325 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 uc_338.20-201ENST00000621563 178 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 MIR6132-201ENST00000622083 109 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 MIR3199-2-201ENST00000636243 86 ntBASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC50Q8IVM0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AC004944.1-201ENST00000517807 3059 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AL109809.4-201ENST00000603520 2185 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AL359851.1-201ENST00000569460 4997 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 RNU6-809P-201ENST00000384461 107 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 MIR218-1-201ENST00000384999 110 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 RNU6-220P-201ENST00000390919 107 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 FCF1P10-201ENST00000407590 479 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 RNU2-36P-201ENST00000410361 191 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 RPL17P12-201ENST00000413391 526 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 ZNF90P2-204ENST00000419323 1075 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AL592045.1-201ENST00000429867 352 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 OSTCP8-201ENST00000445117 448 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AC072039.1-201ENST00000477611 581 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 RPL23AP41-201ENST00000484754 458 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 RPL23AP49-201ENST00000492925 468 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 SNORA31.18-201ENST00000517043 134 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AP001372.4-201ENST00000524889 472 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 ANP32BP3-201ENST00000559213 706 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AC021739.1-201ENST00000559631 174 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 RPS3AP23-202ENST00000574601 686 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 RPS15AP11-201ENST00000594193 385 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 KC877982.1-201ENST00000602313 470 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AF131215.7-201ENST00000602443 707 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AP001981.2-201ENST00000603241 418 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AC008121.1-201ENST00000603244 268 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AP000811.1-201ENST00000603803 651 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AC025588.2-201ENST00000604851 466 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AC007671.2-201ENST00000637344 619 ntBASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC50Q8IVM0 AC006020.1-201ENST00000420179 1854 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 RNU6-1214P-201ENST00000363650 109 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 RNU6-188P-201ENST00000364207 107 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 RNU1-91P-201ENST00000364746 163 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 RNY4P16-201ENST00000364768 94 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 RPL26P27-201ENST00000414397 437 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 RPS24P7-201ENST00000416921 246 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 RPL22P18-201ENST00000417197 377 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 NEFMP1-201ENST00000443423 1006 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 HIGD1AP2-201ENST00000446367 280 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 Z73417.1-201ENST00000447373 778 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 HMGN2P10-201ENST00000448085 265 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 NDUFB4P2-201ENST00000509515 391 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 RNU6-703P-201ENST00000516946 107 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 AC107934.1-201ENST00000522215 217 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 AC006199.1-201ENST00000548728 219 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 AC009097.3-201ENST00000563557 1018 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 AP001004.1-201ENST00000582468 324 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 AL391813.1-201ENST00000603098 260 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 AL358072.1-201ENST00000604156 575 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 AC107294.1-201ENST00000609524 467 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC50Q8IVM0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
CCDC50Q8IVM0 MTND4P35-201ENST00000604257 1375 ntBASIC2.27□□□□□ -2.05
CCDC50Q8IVM0 NACAP2-201ENST00000318548 624 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms