Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 AC034229.5-201ENST00000624258 185 ntBASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 MAPK10-286ENST00000641208 8747 ntBASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 RPL9P7-201ENST00000330965 580 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 Y_RNA.210-201ENST00000364161 110 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 RNU6-827P-201ENST00000365553 106 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 RNU6-1035P-201ENST00000384477 107 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 RPS4XP3-201ENST00000398541 413 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 RNU2-23P-201ENST00000410545 195 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 RNU6-628P-201ENST00000410675 107 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 RNU2-64P-201ENST00000411315 191 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 MRPS18CP6-201ENST00000423587 223 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 AL513043.1-201ENST00000439124 535 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 AL353752.1-201ENST00000454946 260 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 RNA5SP310-201ENST00000459084 116 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 RPL9P9-202ENST00000466501 579 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 AC020890.1-201ENST00000491837 504 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 RN7SL691P-201ENST00000494487 301 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 AC023424.1-201ENST00000496058 459 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 RNU6-377P-201ENST00000515965 102 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 RNU1-103P-201ENST00000516502 125 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 RNU6-703P-201ENST00000516946 107 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 AC007991.1-201ENST00000522680 631 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 MIR8062-201ENST00000621515 85 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 AC126323.6-202ENST00000568092 3511 ntBASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.76□□□□□ -1.65
NPAS4Q8IUM7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 RNU6-1059P-201ENST00000363752 98 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 Y_RNA.424-201ENST00000384063 103 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 RNU6-472P-201ENST00000384299 107 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 MIR23B-201ENST00000384832 97 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 AL591034.1-201ENST00000407447 340 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 NDUFS5P4-201ENST00000412983 318 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 OSTCP8-201ENST00000445117 448 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 RPL9P32-201ENST00000464118 620 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 Y_RNA.687-201ENST00000516558 91 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 AP004607.1-201ENST00000524456 203 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 AC023157.2-201ENST00000540596 141 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 NACAP3-201ENST00000552100 481 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 HSBP1P1-201ENST00000555205 166 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 TVP23BP1-201ENST00000557500 617 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 LINC00933-203ENST00000559812 219 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 AC034105.4-201ENST00000568304 277 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 AC078899.3-201ENST00000599065 212 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 AL139395.1-201ENST00000603662 160 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 AL355297.3-201ENST00000604082 446 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 AC002076.2-201ENST00000617362 122 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 AC073308.1-201ENST00000623696 305 ntBASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NPAS4Q8IUM7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 Y_RNA.106-201ENST00000363189 100 ntBASIC4.74□□□□□ -1.65
NPAS4Q8IUM7 RNU1-73P-201ENST00000383971 164 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms