Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC079395.3-201ENST00000615161 484 ntBASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AC092628.1-201ENST00000436250 252 ntBASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AC004923.2-201ENST00000529649 369 ntBASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AL356585.4-201ENST00000623078 1229 ntBASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 MTND5P11-201ENST00000511037 1812 ntBASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AC100821.1-201ENST00000523153 2479 ntBASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AL442644.1-201ENST00000454390 3105 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 RNU1-72P-201ENST00000362976 153 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 RNA5SP63-201ENST00000391225 112 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 MTCO3P4-201ENST00000419236 787 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 MTND2P19-201ENST00000449129 1012 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 BX248409.1-201ENST00000455497 255 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 SUMO2P2-201ENST00000456482 255 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 AC008834.1-201ENST00000511612 175 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 RNU6-1308P-201ENST00000516817 103 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 AC092470.1-201ENST00000546187 132 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 EIF4A1P12-201ENST00000551910 141 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 AC093510.2-201ENST00000562820 896 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 MIR5571-201ENST00000577998 113 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 AC012557.2-201ENST00000605919 418 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 AL773524.1-201ENST00000614065 229 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 MIR7157-201ENST00000635801 60 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 CR848007.1-201ENST00000442354 1699 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 SNORA68.1-201ENST00000364537 132 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 RNU6-72P-201ENST00000384285 79 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 RNU6-220P-201ENST00000390919 107 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 YWHAZP8-201ENST00000436935 731 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 RPL23AP3-201ENST00000453844 468 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 Z82190.1-201ENST00000454534 490 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 ANKRD26P4-201ENST00000455755 950 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 AC023932.2-201ENST00000603176 175 ntBASIC0.54□□□□□ -2.32
CSPG4Q6UVK1 RNA5SP276-201ENST00000362580 94 ntBASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 Y_RNA.48-201ENST00000362710 103 ntBASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 RNU6-1251P-201ENST00000364502 107 ntBASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 U8.14-201ENST00000390843 143 ntBASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 RNU6-821P-201ENST00000390995 107 ntBASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 AC083875.1-201ENST00000419509 405 ntBASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 snoU13.4-201ENST00000458916 104 ntBASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 OR2A41P-201ENST00000473586 105 ntBASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 TRBVB-201ENST00000477100 408 ntBASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 AC121161.1-201ENST00000510606 652 ntBASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 SNORA31.13-201ENST00000516624 135 ntBASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 SCARNA3-201ENST00000517097 143 ntBASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 AL592148.2-201ENST00000612210 372 ntBASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
CSPG4Q6UVK1 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.53□□□□□ -2.33
CSPG4Q6UVK1 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.53□□□□□ -2.33
CSPG4Q6UVK1 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.53□□□□□ -2.33
CSPG4Q6UVK1 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.53□□□□□ -2.33
CSPG4Q6UVK1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.53□□□□□ -2.33
CSPG4Q6UVK1 AC104108.1-201ENST00000509930 412 ntBASIC0.53□□□□□ -2.33
CSPG4Q6UVK1 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.53□□□□□ -2.33
CSPG4Q6UVK1 RNU6-362P-201ENST00000516736 90 ntBASIC0.53□□□□□ -2.33
CSPG4Q6UVK1 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.53□□□□□ -2.33
CSPG4Q6UVK1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.53□□□□□ -2.33
CSPG4Q6UVK1 OR8K4P-201ENST00000534608 872 ntBASIC0.53□□□□□ -2.33
CSPG4Q6UVK1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.53□□□□□ -2.33
CSPG4Q6UVK1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.53□□□□□ -2.33
CSPG4Q6UVK1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.53□□□□□ -2.33
CSPG4Q6UVK1 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC0.53□□□□□ -2.33
CSPG4Q6UVK1 RNY4P3-201ENST00000365254 95 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 snoU109.1-201ENST00000459339 135 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 RPL30P5-201ENST00000494923 336 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 UBL5P1-201ENST00000507979 193 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AC008751.2-201ENST00000597885 980 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AC106900.2-201ENST00000604994 317 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AC016925.2-201ENST00000605108 242 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AP000238.1-201ENST00000608759 426 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AC006213.5-201ENST00000619673 288 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AL360181.4-201ENST00000621752 134 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 AC245060.5-201ENST00000610778 3293 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 MIR518A2-201ENST00000384966 87 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 U3.29-201ENST00000391296 212 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 RN7SKP158-201ENST00000410453 326 ntBASIC0.52□□□□□ -2.33
CSPG4Q6UVK1 UBE2FP1-201ENST00000416536 447 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms