Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 AL354719.1-201ENST00000406535 843 ntBASIC3.05□□□□□ -1.92
TRNP1Q6NT89 AL513331.1-201ENST00000411908 397 ntBASIC3.05□□□□□ -1.92
TRNP1Q6NT89 AL159169.1-201ENST00000421119 127 ntBASIC3.05□□□□□ -1.92
TRNP1Q6NT89 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.05□□□□□ -1.92
TRNP1Q6NT89 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.05□□□□□ -1.92
TRNP1Q6NT89 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.05□□□□□ -1.92
TRNP1Q6NT89 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.05□□□□□ -1.92
TRNP1Q6NT89 S100A11P2-201ENST00000467589 312 ntBASIC3.05□□□□□ -1.92
TRNP1Q6NT89 RPL27AP5-201ENST00000469428 449 ntBASIC3.05□□□□□ -1.92
TRNP1Q6NT89 AP004217.1-201ENST00000480579 346 ntBASIC3.05□□□□□ -1.92
TRNP1Q6NT89 RPS29P25-201ENST00000481709 171 ntBASIC3.05□□□□□ -1.92
TRNP1Q6NT89 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRNP1Q6NT89 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.05□□□□□ -1.92
TRNP1Q6NT89 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.05□□□□□ -1.92
TRNP1Q6NT89 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.05□□□□□ -1.92
TRNP1Q6NT89 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.05□□□□□ -1.92
TRNP1Q6NT89 OR5BN1P-201ENST00000532955 829 ntBASIC3.05□□□□□ -1.92
TRNP1Q6NT89 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.05□□□□□ -1.92
TRNP1Q6NT89 MIR5583-1-201ENST00000580941 59 ntBASIC3.05□□□□□ -1.92
TRNP1Q6NT89 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.05□□□□□ -1.92
TRNP1Q6NT89 AC010525.2-201ENST00000590920 195 ntBASIC3.05□□□□□ -1.92
TRNP1Q6NT89 AL365204.3-201ENST00000612448 685 ntBASIC3.05□□□□□ -1.92
TRNP1Q6NT89 AC012409.4-201ENST00000612923 249 ntBASIC3.05□□□□□ -1.92
TRNP1Q6NT89 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.05□□□□□ -1.92
TRNP1Q6NT89 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.05□□□□□ -1.92
TRNP1Q6NT89 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TRNP1Q6NT89 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.05□□□□□ -1.92
TRNP1Q6NT89 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 RNU6-552P-201ENST00000362869 119 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 RNU6-190P-201ENST00000384154 102 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 SNORA44-201ENST00000384584 132 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 MIR128-1-201ENST00000384921 82 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 SNORA48.2-201ENST00000390926 124 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 SNORA48.5-201ENST00000391143 135 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 CISD1P1-201ENST00000393907 327 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 AL138885.1-201ENST00000405921 675 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 Y_RNA.604-201ENST00000410574 102 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 AL139413.1-201ENST00000421309 217 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 UBE2D3P2-201ENST00000424409 445 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 RPL7P46-201ENST00000425129 740 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 HMGB1P27-201ENST00000431429 603 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 AP001086.1-201ENST00000494882 321 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 AC074344.1-201ENST00000512823 224 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 SNORA31.3-201ENST00000516029 96 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 RNU6-1038P-201ENST00000516516 104 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 RNU6-358P-201ENST00000516564 75 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 RN7SKP272-201ENST00000516988 232 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 SNORA70.24-201ENST00000517233 118 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 ADI1P3-201ENST00000549509 470 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 MIR3921-201ENST00000577308 85 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 AC013553.2-201ENST00000604244 589 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 AC022893.3-201ENST00000607665 437 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 AC006023.2-201ENST00000609916 167 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 DISC2.1-201ENST00000612827 205 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 AC099654.14-201ENST00000638599 341 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 AC010733.2-201ENST00000589496 5702 ntBASIC3.04□□□□□ -1.92
TRNP1Q6NT89 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRNP1Q6NT89 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TRNP1Q6NT89 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TRNP1Q6NT89 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.03□□□□□ -1.92
TRNP1Q6NT89 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.03□□□□□ -1.92
TRNP1Q6NT89 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.03□□□□□ -1.92
TRNP1Q6NT89 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TRNP1Q6NT89 UBE2L2-201ENST00000254302 429 ntBASIC3.03□□□□□ -1.92
TRNP1Q6NT89 Y_RNA.88-201ENST00000363029 99 ntBASIC3.03□□□□□ -1.92
TRNP1Q6NT89 MIR491-201ENST00000384877 84 ntBASIC3.03□□□□□ -1.92
TRNP1Q6NT89 MIR181B1-201ENST00000385240 110 ntBASIC3.03□□□□□ -1.92
TRNP1Q6NT89 MIR325-201ENST00000385260 98 ntBASIC3.03□□□□□ -1.92
TRNP1Q6NT89 RNU6-550P-201ENST00000391057 101 ntBASIC3.03□□□□□ -1.92
TRNP1Q6NT89 RPS12P24-201ENST00000412619 387 ntBASIC3.03□□□□□ -1.92
TRNP1Q6NT89 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.03□□□□□ -1.92
TRNP1Q6NT89 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.03□□□□□ -1.92
TRNP1Q6NT89 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.03□□□□□ -1.92
TRNP1Q6NT89 RPL35AP12-201ENST00000425362 338 ntBASIC3.03□□□□□ -1.92
TRNP1Q6NT89 AL591212.2-201ENST00000433923 257 ntBASIC3.03□□□□□ -1.92
TRNP1Q6NT89 AC092573.2-201ENST00000434546 243 ntBASIC3.03□□□□□ -1.92
TRNP1Q6NT89 RPL36AP6-201ENST00000435770 321 ntBASIC3.03□□□□□ -1.92
TRNP1Q6NT89 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.03□□□□□ -1.92
TRNP1Q6NT89 HMGN2P16-201ENST00000456802 261 ntBASIC3.03□□□□□ -1.92
TRNP1Q6NT89 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
TRNP1Q6NT89 AC018710.1-201ENST00000506509 158 ntBASIC3.03□□□□□ -1.92
TRNP1Q6NT89 AC117522.3-201ENST00000507974 584 ntBASIC3.03□□□□□ -1.92
TRNP1Q6NT89 SCARNA15.2-201ENST00000516409 127 ntBASIC3.03□□□□□ -1.92
TRNP1Q6NT89 RNU6-677P-201ENST00000516914 101 ntBASIC3.03□□□□□ -1.92
TRNP1Q6NT89 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms