Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 SCARNA15.3-201ENST00000626315 122 ntBASIC3.56□□□□□ -1.84
TTC39AQ5SRH9 SCARNA4.1-201ENST00000628597 123 ntBASIC3.56□□□□□ -1.84
TTC39AQ5SRH9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
TTC39AQ5SRH9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TTC39AQ5SRH9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TTC39AQ5SRH9 CKAP2P1-201ENST00000555477 2049 ntBASIC3.56□□□□□ -1.84
TTC39AQ5SRH9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TTC39AQ5SRH9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TTC39AQ5SRH9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.56□□□□□ -1.84
TTC39AQ5SRH9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 SNORA62.1-201ENST00000364287 154 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 RNU5E-6P-201ENST00000365574 115 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 RNU6-851P-201ENST00000384565 107 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 U3.42-201ENST00000408746 214 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 RNU2-43P-201ENST00000410306 190 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 OR9R1P-201ENST00000412200 877 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 MTCYBP8-201ENST00000422855 651 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 DUTP6-201ENST00000425573 462 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 MED13P1-201ENST00000428342 171 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 AL121601.2-201ENST00000438019 707 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 SEPT14P3-201ENST00000439401 183 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 AC107083.1-201ENST00000439643 279 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 AL732372.2-207ENST00000445840 183 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 SEPT14P2-201ENST00000453405 183 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 RPS29P15-201ENST00000458329 171 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 snoU13.4-201ENST00000458916 104 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 AC008481.1-201ENST00000463278 396 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 AC097462.2-201ENST00000504623 481 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 AC018710.1-201ENST00000506509 158 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 AC008549.1-201ENST00000512900 643 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 AC025465.4-201ENST00000513422 638 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 SEPT14P4-201ENST00000513445 186 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 FO082796.1-201ENST00000523795 183 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 AC055876.1-202ENST00000567053 138 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 AL022099.1-201ENST00000604551 712 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 AL603758.1-201ENST00000618654 241 ntBASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.55□□□□□ -1.84
TTC39AQ5SRH9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 DDX10P1-201ENST00000448545 1933 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AC006020.1-201ENST00000420179 1854 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AL365361.1-201ENST00000566942 3481 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 Y_RNA.160-201ENST00000363677 92 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 RNU4-48P-201ENST00000365559 182 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 RNU6-1074P-201ENST00000383995 104 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 U3.26-201ENST00000391236 204 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 RPL21P3-201ENST00000395517 478 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AL122016.1-201ENST00000403365 367 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AL356776.1-201ENST00000406574 447 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 RNU2-39P-201ENST00000410604 198 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AC114491.1-201ENST00000416095 246 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AC090774.1-201ENST00000435925 246 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 GAPDHP27-201ENST00000447427 1020 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 MTND5P20-201ENST00000448677 143 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 MTND3P10-201ENST00000450967 341 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 RNU6-261P-201ENST00000459506 102 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AC146507.2-201ENST00000460608 476 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 RN7SL75P-201ENST00000461926 281 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AP001486.1-201ENST00000463339 476 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AC010631.1-201ENST00000474150 156 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AC096576.1-201ENST00000489014 359 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AC117522.1-201ENST00000509821 380 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 SNORD27.1-201ENST00000516319 72 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 Y_RNA.702-201ENST00000516843 96 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AF038458.1-201ENST00000588406 262 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 MIR6130-201ENST00000619419 109 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AC096644.4-201ENST00000563417 2912 ntBASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
TTC39AQ5SRH9 AC092435.3-201ENST00000565538 3654 ntBASIC3.53□□□□□ -1.84
TTC39AQ5SRH9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.53□□□□□ -1.84
TTC39AQ5SRH9 SNORA80A-201ENST00000363922 136 ntBASIC3.53□□□□□ -1.84
TTC39AQ5SRH9 SNORA23-201ENST00000365128 182 ntBASIC3.53□□□□□ -1.84
TTC39AQ5SRH9 RNU6-882P-201ENST00000391025 103 ntBASIC3.53□□□□□ -1.84
TTC39AQ5SRH9 OR51A5P-201ENST00000415429 942 ntBASIC3.53□□□□□ -1.84
TTC39AQ5SRH9 RPL21P40-201ENST00000428586 483 ntBASIC3.53□□□□□ -1.84
TTC39AQ5SRH9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.53□□□□□ -1.84
TTC39AQ5SRH9 SNRPEP4-201ENST00000435815 279 ntBASIC3.53□□□□□ -1.84
TTC39AQ5SRH9 MTCO3P45-201ENST00000443036 613 ntBASIC3.53□□□□□ -1.84
TTC39AQ5SRH9 AL135938.1-201ENST00000443141 297 ntBASIC3.53□□□□□ -1.84
TTC39AQ5SRH9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TTC39AQ5SRH9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.53□□□□□ -1.84
TTC39AQ5SRH9 SNORA59A-201ENST00000459326 152 ntBASIC3.53□□□□□ -1.84
TTC39AQ5SRH9 AC126389.1-201ENST00000477436 290 ntBASIC3.53□□□□□ -1.84
TTC39AQ5SRH9 AL049873.1-201ENST00000480540 376 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms