Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MIR4421-201ENST00000578133 69 ntBASIC1□□□□□ -2.25
CCDC58Q4VC31 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
CCDC58Q4VC31 MIR8074-201ENST00000615081 81 ntBASIC1□□□□□ -2.25
CCDC58Q4VC31 uc_338.12-201ENST00000616344 181 ntBASIC1□□□□□ -2.25
CCDC58Q4VC31 AC097655.1-201ENST00000635075 318 ntBASIC1□□□□□ -2.25
CCDC58Q4VC31 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1□□□□□ -2.25
CCDC58Q4VC31 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CCDC58Q4VC31 SNORD115-3-201ENST00000363100 82 ntBASIC0.99□□□□□ -2.25
CCDC58Q4VC31 RNA5SP126-201ENST00000365092 109 ntBASIC0.99□□□□□ -2.25
CCDC58Q4VC31 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CCDC58Q4VC31 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CCDC58Q4VC31 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
CCDC58Q4VC31 RNA5SP501-201ENST00000410990 112 ntBASIC0.99□□□□□ -2.25
CCDC58Q4VC31 USP9YP19-201ENST00000412165 485 ntBASIC0.99□□□□□ -2.25
CCDC58Q4VC31 USP9YP13-201ENST00000417797 480 ntBASIC0.99□□□□□ -2.25
CCDC58Q4VC31 PPP1R11P2-201ENST00000423543 382 ntBASIC0.99□□□□□ -2.25
CCDC58Q4VC31 PSMA6P3-201ENST00000428242 164 ntBASIC0.99□□□□□ -2.25
CCDC58Q4VC31 AC017099.1-201ENST00000448261 1028 ntBASIC0.99□□□□□ -2.25
CCDC58Q4VC31 AC006512.1-201ENST00000468816 291 ntBASIC0.99□□□□□ -2.25
CCDC58Q4VC31 RNU7-40P-201ENST00000516397 64 ntBASIC0.99□□□□□ -2.25
CCDC58Q4VC31 AC084364.2-201ENST00000546924 395 ntBASIC0.99□□□□□ -2.25
CCDC58Q4VC31 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.99□□□□□ -2.25
CCDC58Q4VC31 MIR4303-201ENST00000581299 66 ntBASIC0.99□□□□□ -2.25
CCDC58Q4VC31 BNIP3P23-201ENST00000599655 511 ntBASIC0.99□□□□□ -2.25
CCDC58Q4VC31 AC092953.2-201ENST00000608000 699 ntBASIC0.99□□□□□ -2.25
CCDC58Q4VC31 AP005229.2-201ENST00000609980 697 ntBASIC0.99□□□□□ -2.25
CCDC58Q4VC31 AL512506.2-201ENST00000624472 458 ntBASIC0.99□□□□□ -2.25
CCDC58Q4VC31 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.98□□□□□ -2.25
CCDC58Q4VC31 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.98□□□□□ -2.25
CCDC58Q4VC31 MIR513A1-201ENST00000385138 129 ntBASIC0.98□□□□□ -2.25
CCDC58Q4VC31 AL591034.2-201ENST00000402839 359 ntBASIC0.98□□□□□ -2.25
CCDC58Q4VC31 MIR1289-2-201ENST00000408360 111 ntBASIC0.98□□□□□ -2.25
CCDC58Q4VC31 RNU6-77P-201ENST00000410554 91 ntBASIC0.98□□□□□ -2.25
CCDC58Q4VC31 AC078974.1-201ENST00000411597 223 ntBASIC0.98□□□□□ -2.25
CCDC58Q4VC31 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CCDC58Q4VC31 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.98□□□□□ -2.25
CCDC58Q4VC31 OR6C66P-201ENST00000414917 930 ntBASIC0.98□□□□□ -2.25
CCDC58Q4VC31 AC008850.1-201ENST00000427546 362 ntBASIC0.98□□□□□ -2.25
CCDC58Q4VC31 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.98□□□□□ -2.25
CCDC58Q4VC31 AL121594.1-201ENST00000475906 575 ntBASIC0.98□□□□□ -2.25
CCDC58Q4VC31 AC092902.1-201ENST00000486999 259 ntBASIC0.98□□□□□ -2.25
CCDC58Q4VC31 RPL36AP21-201ENST00000490372 323 ntBASIC0.98□□□□□ -2.25
CCDC58Q4VC31 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.98□□□□□ -2.25
CCDC58Q4VC31 MTCO1P31-201ENST00000506355 492 ntBASIC0.98□□□□□ -2.25
CCDC58Q4VC31 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.98□□□□□ -2.25
CCDC58Q4VC31 AC025918.2-201ENST00000558683 763 ntBASIC0.98□□□□□ -2.25
CCDC58Q4VC31 MIR3167-201ENST00000579623 85 ntBASIC0.98□□□□□ -2.25
CCDC58Q4VC31 AL512598.1-201ENST00000610158 273 ntBASIC0.98□□□□□ -2.25
CCDC58Q4VC31 AC024257.5-201ENST00000612739 531 ntBASIC0.98□□□□□ -2.25
CCDC58Q4VC31 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
CCDC58Q4VC31 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CCDC58Q4VC31 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CCDC58Q4VC31 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CCDC58Q4VC31 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.97□□□□□ -2.25
CCDC58Q4VC31 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
CCDC58Q4VC31 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CCDC58Q4VC31 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CCDC58Q4VC31 RNU6-439P-201ENST00000384188 106 ntBASIC0.97□□□□□ -2.25
CCDC58Q4VC31 RNU1-57P-201ENST00000384491 166 ntBASIC0.97□□□□□ -2.25
CCDC58Q4VC31 SKA2P1-201ENST00000425592 390 ntBASIC0.97□□□□□ -2.25
CCDC58Q4VC31 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.97□□□□□ -2.25
CCDC58Q4VC31 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.97□□□□□ -2.25
CCDC58Q4VC31 BOLA3P3-201ENST00000505182 232 ntBASIC0.97□□□□□ -2.25
CCDC58Q4VC31 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.97□□□□□ -2.25
CCDC58Q4VC31 MTCYBP16-201ENST00000509187 1129 ntBASIC0.97□□□□□ -2.25
CCDC58Q4VC31 SNORA48.9-201ENST00000516419 162 ntBASIC0.97□□□□□ -2.25
CCDC58Q4VC31 AC124293.1-201ENST00000530034 493 ntBASIC0.97□□□□□ -2.25
CCDC58Q4VC31 SULT1C2P1-202ENST00000562418 459 ntBASIC0.97□□□□□ -2.25
CCDC58Q4VC31 MIR4295-201ENST00000585286 85 ntBASIC0.97□□□□□ -2.25
CCDC58Q4VC31 DUXAP11-201ENST00000603858 526 ntBASIC0.97□□□□□ -2.25
CCDC58Q4VC31 BNIP3P19-201ENST00000605397 577 ntBASIC0.97□□□□□ -2.25
CCDC58Q4VC31 AL121890.5-201ENST00000620848 304 ntBASIC0.97□□□□□ -2.25
CCDC58Q4VC31 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.96□□□□□ -2.26
CCDC58Q4VC31 RNU1-23P-201ENST00000363361 144 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 RNU6-819P-201ENST00000364116 107 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 MIR7-1-201ENST00000384871 110 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 RNU11-3P-201ENST00000391111 133 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 PIGPP2-201ENST00000411569 458 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.96□□□□□ -2.26
CCDC58Q4VC31 AC097463.2-201ENST00000421074 142 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 RPL7P34-201ENST00000433316 712 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.96□□□□□ -2.26
CCDC58Q4VC31 AL161651.1-201ENST00000440882 223 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 RPL23AP76-201ENST00000441860 458 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 AL513124.1-201ENST00000450410 614 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.96□□□□□ -2.26
CCDC58Q4VC31 RN7SKP210-201ENST00000459176 261 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
CCDC58Q4VC31 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.96□□□□□ -2.26
CCDC58Q4VC31 RNU6-548P-201ENST00000517083 115 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 IGJP1-201ENST00000522682 475 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 AP003122.4-201ENST00000530980 758 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 AC090079.2-201ENST00000575289 768 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.96□□□□□ -2.26
CCDC58Q4VC31 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.96□□□□□ -2.26
CCDC58Q4VC31 AC013412.1-201ENST00000610687 192 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 DUSP12P1-201ENST00000612874 516 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 AP003485.1-201ENST00000625093 753 ntBASIC0.96□□□□□ -2.26
CCDC58Q4VC31 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.96□□□□□ -2.26
CCDC58Q4VC31 MTCO1P18-201ENST00000455518 1419 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms