Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 AC010653.1-201ENST00000571108 881 ntBASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 MIR1254-2-201ENST00000579553 63 ntBASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 AC015917.1-201ENST00000579654 510 ntBASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 MIR4276-201ENST00000584832 70 ntBASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 AC008739.3-201ENST00000603262 127 ntBASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 AC007938.3-201ENST00000604965 623 ntBASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 AC093788.1-201ENST00000609356 927 ntBASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 AC068792.1-201ENST00000621354 417 ntBASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 U6.105-201ENST00000637379 88 ntBASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 AC004944.1-201ENST00000517807 3059 ntBASIC3.11□□□□□ -1.91
PRICKLE4Q2TBC4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 MTCO1P12-201ENST00000414273 1543 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 SNORA71.3-201ENST00000362582 128 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 Y_RNA.381-201ENST00000365666 102 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 RNU6-45P-201ENST00000384471 107 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 RNU6-903P-201ENST00000391270 109 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 SNORA48.7-201ENST00000391302 135 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 SNORA48.8-201ENST00000391324 134 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 RN7SKP285-201ENST00000410137 318 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 RNU2-49P-201ENST00000410666 184 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 Y_RNA.623-201ENST00000411128 95 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 FCF1P9-201ENST00000412546 282 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 USP9YP27-201ENST00000418455 438 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AL358075.3-201ENST00000426289 226 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AL365496.1-201ENST00000426885 215 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AC097713.2-201ENST00000430199 356 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 BX679664.1-201ENST00000434429 253 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 Z99127.3-201ENST00000448158 395 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AC073415.1-201ENST00000449240 153 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AC006026.2-201ENST00000457376 180 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 RPL21P10-201ENST00000463521 490 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AC004801.2-202ENST00000463559 283 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AC019235.1-201ENST00000503847 207 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AC074344.1-201ENST00000512823 224 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 RNA5SP401-201ENST00000515920 127 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 MTND4P7-201ENST00000523876 130 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AL137161.1-201ENST00000532231 390 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 MIR3941-201ENST00000582572 103 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AL451007.1-201ENST00000595491 289 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AL035413.2-201ENST00000604801 525 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AF250324.2-201ENST00000608299 610 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 UCA1.1-201ENST00000620952 75 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AC092628.2-201ENST00000622492 339 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AC068137.3-201ENST00000639191 341 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 AC073869.6-201ENST00000640656 341 ntBASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
PRICKLE4Q2TBC4 MAPK10-322ENST00000641485 4530 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 HSPA8P4-201ENST00000511877 1920 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 RNU1-70P-201ENST00000362618 164 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 RNU6-715P-201ENST00000365204 103 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 SNORA69-201ENST00000383895 132 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 Y_RNA.402-201ENST00000383972 102 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 RNU6-393P-201ENST00000384475 107 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 MIR578-201ENST00000384828 96 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 RNA5SP31-201ENST00000411144 127 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 UBE2V1P10-201ENST00000414685 269 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 AC093578.1-201ENST00000415219 368 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 HMGN2P10-201ENST00000448085 265 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 NDUFB1P2-201ENST00000449477 176 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 AL118520.1-201ENST00000450770 291 ntBASIC3.09□□□□□ -1.91
PRICKLE4Q2TBC4 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms