Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 SNORA62.1-201ENST00000364287 154 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 RNU6-283P-201ENST00000364788 107 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 Y_RNA.460-201ENST00000384255 102 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 AL591416.1-201ENST00000404015 867 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 AL356432.1-201ENST00000405809 419 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 FAT1P1-201ENST00000406588 507 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 AC006028.1-201ENST00000438379 402 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 CBWD4P-201ENST00000445695 655 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 AC110794.1-201ENST00000505816 425 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 AC108078.2-201ENST00000510750 236 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 RNA5SP401-201ENST00000515920 127 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 RNU1-61P-201ENST00000516107 151 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 SNORD60.2-201ENST00000516883 86 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 AC007619.2-201ENST00000605743 379 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 RMST_8.1-201ENST00000610287 165 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 SCARNA15.3-201ENST00000626315 122 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 SCARNA4.1-201ENST00000628597 123 ntBASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM71Q2Q1W2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 RPL7P26-201ENST00000333817 754 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 RNU4-79P-201ENST00000362764 141 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 RNU4-48P-201ENST00000365559 182 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 RNU4-47P-201ENST00000410876 114 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 RNU7-63P-201ENST00000459054 62 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 RNU6-953P-201ENST00000459154 107 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 RPL27AP5-201ENST00000469428 449 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 AP002884.2-201ENST00000471647 395 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 AC006445.1-201ENST00000491925 405 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 HMGN1P13-201ENST00000505795 138 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 RN7SKP60-201ENST00000516985 239 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 RNA5SP291-201ENST00000517222 105 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 AC005498.1-201ENST00000592125 465 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 AL050343.2-201ENST00000607338 280 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 AC090574.1-201ENST00000623186 233 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 AC118273.1-201ENST00000525324 3006 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 AL079305.1-201ENST00000623159 3008 ntBASIC3.69□□□□□ -1.82
TRIM71Q2Q1W2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 AC068647.1-201ENST00000489539 2265 ntBASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 SNORA24.1-201ENST00000384401 135 ntBASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 NDUFB4P7-201ENST00000423198 363 ntBASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 MTCO3P46-201ENST00000425787 232 ntBASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 AC006989.1-201ENST00000427212 131 ntBASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 AC092573.2-201ENST00000434546 243 ntBASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 AC009237.8-201ENST00000445492 379 ntBASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 CACYBPP2-201ENST00000453625 678 ntBASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 AL356010.1-201ENST00000456364 102 ntBASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 RNU7-182P-201ENST00000459009 62 ntBASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 RNA5SP341-201ENST00000516261 117 ntBASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 RN7SKP83-201ENST00000516512 178 ntBASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 RNU6-677P-201ENST00000516914 101 ntBASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM71Q2Q1W2 AC243972.3-201ENST00000539655 198 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms