Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 SDR42E1P2-201ENST00000614861 481 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.64□□□□□ -1.99
PTCH1Q13635 AC006386.1-201ENST00000619436 415 ntBASIC2.64□□□□□ -1.99
PTCH1Q13635 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.64□□□□□ -1.99
PTCH1Q13635 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PTCH1Q13635 RNU6-621P-201ENST00000364752 109 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 Y_RNA.465-201ENST00000384293 102 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 U3.20-201ENST00000390909 217 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 AL356057.2-201ENST00000403318 432 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 RNU2-33P-201ENST00000410344 192 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.63□□□□□ -1.99
PTCH1Q13635 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.63□□□□□ -1.99
PTCH1Q13635 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.63□□□□□ -1.99
PTCH1Q13635 AC092648.1-201ENST00000425870 423 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.63□□□□□ -1.99
PTCH1Q13635 GTF2IP20-201ENST00000431663 360 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.63□□□□□ -1.99
PTCH1Q13635 RPS15AP7-201ENST00000439294 405 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.63□□□□□ -1.99
PTCH1Q13635 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.63□□□□□ -1.99
PTCH1Q13635 MRPS17P3-201ENST00000465453 385 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 CDC42P4-201ENST00000510507 563 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.63□□□□□ -1.99
PTCH1Q13635 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
PTCH1Q13635 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.63□□□□□ -1.99
PTCH1Q13635 LRRC34P1-201ENST00000542742 915 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.63□□□□□ -1.99
PTCH1Q13635 HMGN2P15-201ENST00000585707 270 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 AC024560.3-201ENST00000608482 349 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 FTX_3.1-201ENST00000610451 147 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 AC087683.2-201ENST00000611384 326 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 AC008498.1-201ENST00000613012 531 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 AC009159.2-201ENST00000617603 606 ntBASIC2.63□□□□□ -1.99
PTCH1Q13635 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.63□□□□□ -1.99
PTCH1Q13635 RNU6-906P-201ENST00000384700 70 ntBASIC2.62□□□□□ -1.99
PTCH1Q13635 ERHP2-201ENST00000402323 299 ntBASIC2.62□□□□□ -1.99
PTCH1Q13635 MIR1294-201ENST00000408503 142 ntBASIC2.62□□□□□ -1.99
PTCH1Q13635 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.62□□□□□ -1.99
PTCH1Q13635 UBE2FP1-201ENST00000416536 447 ntBASIC2.62□□□□□ -1.99
PTCH1Q13635 VPS26BP1-201ENST00000417155 755 ntBASIC2.62□□□□□ -1.99
PTCH1Q13635 MTCYBP38-201ENST00000417160 1123 ntBASIC2.62□□□□□ -1.99
PTCH1Q13635 AC027124.2-201ENST00000428249 105 ntBASIC2.62□□□□□ -1.99
PTCH1Q13635 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.62□□□□□ -1.99
PTCH1Q13635 Z73417.1-201ENST00000447373 778 ntBASIC2.62□□□□□ -1.99
PTCH1Q13635 AC135721.1-201ENST00000497954 479 ntBASIC2.62□□□□□ -1.99
PTCH1Q13635 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.62□□□□□ -1.99
PTCH1Q13635 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.62□□□□□ -1.99
PTCH1Q13635 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.62□□□□□ -1.99
PTCH1Q13635 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.62□□□□□ -1.99
PTCH1Q13635 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PTCH1Q13635 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.62□□□□□ -1.99
PTCH1Q13635 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.62□□□□□ -1.99
PTCH1Q13635 MIR4303-201ENST00000581299 66 ntBASIC2.62□□□□□ -1.99
PTCH1Q13635 AF038458.1-201ENST00000588406 262 ntBASIC2.62□□□□□ -1.99
PTCH1Q13635 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.62□□□□□ -1.99
PTCH1Q13635 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.62□□□□□ -1.99
PTCH1Q13635 AC022022.2-201ENST00000602989 360 ntBASIC2.62□□□□□ -1.99
PTCH1Q13635 TUG1_2.1-201ENST00000614234 87 ntBASIC2.62□□□□□ -1.99
PTCH1Q13635 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.62□□□□□ -1.99
PTCH1Q13635 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.62□□□□□ -1.99
PTCH1Q13635 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.62□□□□□ -1.99
PTCH1Q13635 AC099786.3-201ENST00000565735 1410 ntBASIC2.62□□□□□ -1.99
PTCH1Q13635 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.62□□□□□ -1.99
PTCH1Q13635 SNORA68.1-201ENST00000364537 132 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 RNU4-28P-201ENST00000364739 141 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 AF228730.1-201ENST00000397972 663 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 USP9YP6-201ENST00000413550 854 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.61□□□□□ -1.99
PTCH1Q13635 RPS3AP37-201ENST00000419176 745 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 AL451054.2-201ENST00000420896 202 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 CR769776.1-201ENST00000441254 787 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 RPL23AP20-201ENST00000447965 421 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.61□□□□□ -1.99
PTCH1Q13635 USP9YP10-201ENST00000454868 628 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 AC055855.1-201ENST00000489563 579 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 AL160314.1-201ENST00000490836 438 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 AC022447.3-201ENST00000506865 495 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 AC116353.3-201ENST00000511215 249 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.61□□□□□ -1.99
PTCH1Q13635 SNORA31.18-201ENST00000517043 134 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 AC022634.1-201ENST00000520765 532 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.61□□□□□ -1.99
PTCH1Q13635 OR1M4P-201ENST00000589199 287 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 AC068790.3-201ENST00000602988 553 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 AC009314.1-201ENST00000603871 304 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 MTND4LP5-201ENST00000605152 292 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 AC011890.2-201ENST00000613393 294 ntBASIC2.61□□□□□ -1.99
PTCH1Q13635 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PTCH1Q13635 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.6□□□□□ -1.99
PTCH1Q13635 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PTCH1Q13635 MIR888-201ENST00000401186 77 ntBASIC2.6□□□□□ -1.99
PTCH1Q13635 MIR320C1-201ENST00000408566 88 ntBASIC2.6□□□□□ -1.99
PTCH1Q13635 RNU4-22P-201ENST00000411058 166 ntBASIC2.6□□□□□ -1.99
PTCH1Q13635 HIGD1AP15-201ENST00000416198 280 ntBASIC2.6□□□□□ -1.99
PTCH1Q13635 USP9YP13-201ENST00000417797 480 ntBASIC2.6□□□□□ -1.99
PTCH1Q13635 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.6□□□□□ -1.99
PTCH1Q13635 WARS2P1-201ENST00000429678 537 ntBASIC2.6□□□□□ -1.99
PTCH1Q13635 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.6□□□□□ -1.99
PTCH1Q13635 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.6□□□□□ -1.99
PTCH1Q13635 AL021397.1-201ENST00000451806 248 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms