Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 AC007496.3-201ENST00000624987 3443 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 HSPE1P11-201ENST00000339579 310 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 SNORA71.1-201ENST00000364523 117 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 AP002088.1-201ENST00000382740 395 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 RNU6-1029P-201ENST00000384109 107 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 MIR454-201ENST00000390180 115 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
DSC1Q08554 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DSC1Q08554 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.32□□□□□ -1.88
DSC1Q08554 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.32□□□□□ -1.88
DSC1Q08554 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.32□□□□□ -1.88
DSC1Q08554 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.32□□□□□ -1.88
DSC1Q08554 AL513185.2-201ENST00000425543 193 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 MED13P1-201ENST00000428342 171 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.32□□□□□ -1.88
DSC1Q08554 CALM1P1-201ENST00000442082 433 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.32□□□□□ -1.88
DSC1Q08554 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.32□□□□□ -1.88
DSC1Q08554 HMGN2P16-201ENST00000456802 261 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.32□□□□□ -1.88
DSC1Q08554 SCARNA20.6-201ENST00000517251 106 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 AC009812.2-201ENST00000517657 457 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DSC1Q08554 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DSC1Q08554 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.32□□□□□ -1.88
DSC1Q08554 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.32□□□□□ -1.88
DSC1Q08554 RPS3AP23-202ENST00000574601 686 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.32□□□□□ -1.88
DSC1Q08554 MIR4425-201ENST00000580572 84 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.32□□□□□ -1.88
DSC1Q08554 AL356055.1-201ENST00000602528 446 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 AL355810.1-201ENST00000614629 552 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 AL603758.1-201ENST00000618654 241 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 AL136221.1-201ENST00000621449 509 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 AL353748.2-201ENST00000622148 471 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 AP003122.6-201ENST00000623831 495 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 AC091903.1-201ENST00000624322 454 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 AC073476.4-201ENST00000628409 72 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 AC099654.5-201ENST00000636479 350 ntBASIC3.32□□□□□ -1.88
DSC1Q08554 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DSC1Q08554 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DSC1Q08554 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
DSC1Q08554 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
DSC1Q08554 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DSC1Q08554 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
DSC1Q08554 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DSC1Q08554 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
DSC1Q08554 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.31□□□□□ -1.88
DSC1Q08554 SNORD81.2-201ENST00000365153 76 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 SMIM11P1-201ENST00000369586 178 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 RNU6-701P-201ENST00000384059 107 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 SNORD67-201ENST00000390833 111 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 SNORD37.1-201ENST00000390968 65 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 RNU6-903P-201ENST00000391270 109 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 AL109755.1-201ENST00000401791 649 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 MIR1289-1-201ENST00000408836 144 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.31□□□□□ -1.88
DSC1Q08554 AC012498.1-201ENST00000424037 437 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 RPL7L1P10-201ENST00000427790 463 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 AC004866.2-201ENST00000438285 481 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.31□□□□□ -1.88
DSC1Q08554 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.31□□□□□ -1.88
DSC1Q08554 CBWD4P-201ENST00000445695 655 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 MTND1P9-201ENST00000453775 944 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.31□□□□□ -1.88
DSC1Q08554 GMFBP1-201ENST00000467831 427 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.31□□□□□ -1.88
DSC1Q08554 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.31□□□□□ -1.88
DSC1Q08554 RBBP4P6-201ENST00000508098 202 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.31□□□□□ -1.88
DSC1Q08554 TTC39CP1-201ENST00000512513 755 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 RNU6-390P-201ENST00000516259 103 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 AC103783.1-201ENST00000520506 373 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.31□□□□□ -1.88
DSC1Q08554 SNRPGP16-201ENST00000533275 226 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 AC243972.3-201ENST00000539655 198 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.31□□□□□ -1.88
DSC1Q08554 FAM60BP-201ENST00000578364 658 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 AF038458.1-201ENST00000588406 262 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 AL589994.2-201ENST00000621124 579 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 AC011155.2-201ENST00000623202 216 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 AL035425.3-201ENST00000564206 4996 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.31□□□□□ -1.88
DSC1Q08554 SRP72P2-201ENST00000344851 1979 ntBASIC3.31□□□□□ -1.88
DSC1Q08554 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
DSC1Q08554 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
DSC1Q08554 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.3□□□□□ -1.88
DSC1Q08554 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
DSC1Q08554 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
DSC1Q08554 RNU6-845P-201ENST00000362578 103 ntBASIC3.3□□□□□ -1.88
DSC1Q08554 RNU6-552P-201ENST00000362869 119 ntBASIC3.3□□□□□ -1.88
DSC1Q08554 RNU4-73P-201ENST00000363164 141 ntBASIC3.3□□□□□ -1.88
DSC1Q08554 Y_RNA.142-201ENST00000363491 102 ntBASIC3.3□□□□□ -1.88
DSC1Q08554 DEFB109C-201ENST00000382575 264 ntBASIC3.3□□□□□ -1.88
DSC1Q08554 DEFB109B-201ENST00000382656 264 ntBASIC3.3□□□□□ -1.88
DSC1Q08554 RNU6-767P-201ENST00000384132 107 ntBASIC3.3□□□□□ -1.88
DSC1Q08554 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
DSC1Q08554 RNA5SP31-201ENST00000411144 127 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms