Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SCN1BQ07699 Y_RNA.201-201ENST00000364052 96 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 RNU1-33P-201ENST00000364249 162 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 RNU4-91P-201ENST00000364778 135 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 RNU1-100P-201ENST00000365255 165 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SCN1BQ07699 UBE2V1P2-201ENST00000397758 440 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 RN7SKP142-201ENST00000411236 328 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.65□□□□□ -1.99
SCN1BQ07699 AC016831.2-201ENST00000417179 352 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.65□□□□□ -1.99
SCN1BQ07699 AC092017.2-201ENST00000427600 362 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 MTATP6P17-201ENST00000431030 672 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 MICF-203ENST00000432679 129 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SCN1BQ07699 ELOCP23-201ENST00000452014 332 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 RN7SL297P-201ENST00000483161 293 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 AC011005.2-201ENST00000487324 359 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 AC110794.1-201ENST00000505816 425 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 AC116562.3-201ENST00000506136 177 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 AC117522.2-201ENST00000510049 657 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 AC112206.3-201ENST00000514578 389 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 SNORA25.11-201ENST00000515935 105 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 SCARNA3-201ENST00000517097 143 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.65□□□□□ -1.99
SCN1BQ07699 AP001646.1-201ENST00000527936 915 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 AC068587.5-201ENST00000528506 175 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.65□□□□□ -1.99
SCN1BQ07699 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SCN1BQ07699 AC004486.1-201ENST00000546846 233 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 AC138761.3-201ENST00000579993 334 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 MIR2682-201ENST00000580305 110 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 MIR548AC-201ENST00000585049 88 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 AC008521.1-201ENST00000587471 187 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.65□□□□□ -1.99
SCN1BQ07699 AL590229.1-201ENST00000603497 542 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 AC064872.1-201ENST00000604823 1072 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.65□□□□□ -1.99
SCN1BQ07699 HMGB1P24-202ENST00000615653 685 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 AL109809.4-201ENST00000603520 2185 ntBASIC2.65□□□□□ -1.99
SCN1BQ07699 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SCN1BQ07699 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.65□□□□□ -1.99
SCN1BQ07699 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.65□□□□□ -1.99
SCN1BQ07699 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SCN1BQ07699 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.64□□□□□ -1.99
SCN1BQ07699 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.64□□□□□ -1.99
SCN1BQ07699 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 SNORD116-8-201ENST00000384365 95 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 RNU6-248P-201ENST00000410720 107 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 Y_RNA.623-201ENST00000411128 95 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 RNA5SP111-201ENST00000411386 101 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.64□□□□□ -1.99
SCN1BQ07699 AL031779.1-201ENST00000415663 330 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.64□□□□□ -1.99
SCN1BQ07699 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.64□□□□□ -1.99
SCN1BQ07699 RPS20P5-201ENST00000434808 360 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 AC006028.1-201ENST00000438379 402 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.64□□□□□ -1.99
SCN1BQ07699 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SCN1BQ07699 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.64□□□□□ -1.99
SCN1BQ07699 AL441985.1-201ENST00000457727 251 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 AC008155.2-201ENST00000464337 397 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 AC004924.1-201ENST00000480160 781 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 AC103975.1-201ENST00000482506 483 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 AC091965.2-201ENST00000512324 613 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 AC108043.1-201ENST00000512696 574 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.64□□□□□ -1.99
SCN1BQ07699 SNORA67.7-201ENST00000516664 135 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 RNU6-410P-201ENST00000517006 107 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.64□□□□□ -1.99
SCN1BQ07699 AC010186.2-204ENST00000537668 439 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 AC023824.2-201ENST00000566185 400 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.64□□□□□ -1.99
SCN1BQ07699 MIR3670-2-201ENST00000582974 65 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 MIR3670-1-201ENST00000584160 65 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 MIR3670-3-201ENST00000584855 65 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 AP000787.2-201ENST00000604432 568 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 AL670379.4-201ENST00000605279 254 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 MIR3670-4-201ENST00000612260 65 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.64□□□□□ -1.99
SCN1BQ07699 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SCN1BQ07699 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 AC010338.1-201ENST00000621823 717 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.64□□□□□ -1.99
SCN1BQ07699 AC093648.1-201ENST00000623546 606 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.64□□□□□ -1.99
SCN1BQ07699 AL161912.2-201ENST00000565707 3007 ntBASIC2.64□□□□□ -1.99
SCN1BQ07699 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
SCN1BQ07699 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.63□□□□□ -1.99
SCN1BQ07699 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.63□□□□□ -1.99
SCN1BQ07699 MIR412-201ENST00000362142 91 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 Y_RNA.367-201ENST00000365544 101 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 SNORD15B-201ENST00000384714 146 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 MIR578-201ENST00000384828 96 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.63□□□□□ -1.99
SCN1BQ07699 AL139039.1-201ENST00000401900 692 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 AL133475.1-201ENST00000404414 305 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SCN1BQ07699 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms