Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATXN1P54253 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
ATXN1P54253 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATXN1P54253 RNU6-637P-201ENST00000384050 107 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 Y_RNA.447-201ENST00000384184 113 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 U3.26-201ENST00000391236 204 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 AL591416.1-201ENST00000404015 867 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 SNORA3.3-201ENST00000408712 125 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 MIR1289-1-201ENST00000408836 144 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 RNU4-65P-201ENST00000410473 140 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 MTND3P8-201ENST00000412909 339 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.97□□□□□ -1.77
ATXN1P54253 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 AL139247.1-201ENST00000422768 325 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.97□□□□□ -1.77
ATXN1P54253 RPL36AP53-201ENST00000432891 316 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 RPS3AP52-201ENST00000435639 297 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 SETP5-201ENST00000437270 562 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 HMGN2P26-201ENST00000463169 339 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 TRBV12-2-201ENST00000489763 344 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.97□□□□□ -1.77
ATXN1P54253 RNU4-49P-201ENST00000516080 140 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 RNU6-559P-201ENST00000516151 98 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 RNU2-10P-201ENST00000516375 211 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 RNU7-51P-201ENST00000516560 62 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 IGKV2D-23-201ENST00000518179 286 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 AC103783.1-201ENST00000520506 373 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.97□□□□□ -1.77
ATXN1P54253 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.97□□□□□ -1.77
ATXN1P54253 OR5B10P-201ENST00000532869 642 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.97□□□□□ -1.77
ATXN1P54253 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.97□□□□□ -1.77
ATXN1P54253 AC026464.5-201ENST00000562497 722 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.97□□□□□ -1.77
ATXN1P54253 AC055876.1-202ENST00000567053 138 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 AC087499.8-201ENST00000578406 226 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 OR4K8P-201ENST00000578842 1048 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ATXN1P54253 DPPA3P3-201ENST00000603842 430 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.97□□□□□ -1.77
ATXN1P54253 AC107871.2-201ENST00000612894 502 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 AC005344.1-201ENST00000613391 459 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
ATXN1P54253 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.97□□□□□ -1.77
ATXN1P54253 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.97□□□□□ -1.77
ATXN1P54253 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
ATXN1P54253 API5P2-201ENST00000397055 1498 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 AP004289.2-201ENST00000444413 1457 ntBASIC3.97□□□□□ -1.77
ATXN1P54253 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ATXN1P54253 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ATXN1P54253 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATXN1P54253 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATXN1P54253 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.97□□□□□ -1.77
ATXN1P54253 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATXN1P54253 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.96□□□□□ -1.78
ATXN1P54253 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.96□□□□□ -1.78
ATXN1P54253 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATXN1P54253 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.96□□□□□ -1.78
ATXN1P54253 HSPE1P11-201ENST00000339579 310 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 RNU6-223P-201ENST00000362830 107 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 Y_RNA.574-201ENST00000384766 95 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 MIR558-201ENST00000384920 94 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 RNU6-882P-201ENST00000391025 103 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 RNA5SP118-201ENST00000410385 109 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 MTCYBP10-201ENST00000424905 650 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 RPL7P28-201ENST00000437739 740 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 DDX3P2-201ENST00000446138 111 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 AC078785.3-201ENST00000476607 425 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
ATXN1P54253 AC135721.1-201ENST00000497954 479 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.96□□□□□ -1.78
ATXN1P54253 AC093303.1-201ENST00000514549 295 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 SMURF2P1-201ENST00000514992 481 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.96□□□□□ -1.78
ATXN1P54253 RNA5SP401-201ENST00000515920 127 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 RNU6-764P-201ENST00000516396 105 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 RANP9-201ENST00000519957 271 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 AC007991.1-201ENST00000522680 631 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.96□□□□□ -1.78
ATXN1P54253 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.96□□□□□ -1.78
ATXN1P54253 AC128657.1-201ENST00000549459 145 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 AC018889.1-201ENST00000605372 397 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 DISC2.1-201ENST00000612827 205 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.96□□□□□ -1.78
ATXN1P54253 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.96□□□□□ -1.78
ATXN1P54253 AL354950.2-201ENST00000617939 290 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.96□□□□□ -1.78
ATXN1P54253 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATXN1P54253 MFSD8-236ENST00000641509 4050 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
ATXN1P54253 AF117829.1-206ENST00000621883 3802 ntBASIC3.96□□□□□ -1.78
ATXN1P54253 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ATXN1P54253 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ATXN1P54253 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
ATXN1P54253 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
ATXN1P54253 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.95□□□□□ -1.78
ATXN1P54253 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.95□□□□□ -1.78
ATXN1P54253 Y_RNA.22-201ENST00000362492 102 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 RNU6-511P-201ENST00000363496 107 ntBASIC3.95□□□□□ -1.78
ATXN1P54253 Y_RNA.153-201ENST00000363615 91 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms