Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 Y_RNA.157-201ENST00000363638 102 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 Y_RNA.167-201ENST00000363735 109 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 AC068538.1-201ENST00000376856 336 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 Y_RNA.534-201ENST00000384599 112 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
HOXA1P49639 SNORA16.2-201ENST00000390991 127 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 SNORD70.1-201ENST00000391007 85 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 RPL21P75-201ENST00000396599 483 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 RPL21P28-201ENST00000401418 483 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 AL592114.1-201ENST00000403842 483 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 AL357075.1-201ENST00000404107 726 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 PPIAP31-201ENST00000405422 495 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 U3.39-201ENST00000408569 239 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HOXA1P49639 RNU6-373P-201ENST00000411247 98 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 Y_RNA.625-201ENST00000411256 107 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXA1P49639 RSL24D1P6-201ENST00000426934 401 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 AL669831.1-202ENST00000428504 417 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 GTF2IP13-201ENST00000438487 386 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXA1P49639 RPL21P39-201ENST00000463605 483 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.87□□□□□ -1.95
HOXA1P49639 AC087190.1-201ENST00000484462 480 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 AC093591.1-201ENST00000491435 481 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 RPL21P129-201ENST00000491732 478 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 RPL21P16-201ENST00000495531 483 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 AC010486.1-201ENST00000511793 424 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 AC008549.1-201ENST00000512900 643 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 LRRC34P2-201ENST00000514850 553 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 RNU6-579P-201ENST00000516879 102 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 MIR2276-201ENST00000516886 89 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 SCARNA14-201ENST00000516903 136 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXA1P49639 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXA1P49639 OR8R1P-201ENST00000543943 764 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXA1P49639 AC011712.1-201ENST00000588959 234 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.87□□□□□ -1.95
HOXA1P49639 AL138889.2-201ENST00000603883 242 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 ATP1B3P1-201ENST00000605365 821 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXA1P49639 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.87□□□□□ -1.95
HOXA1P49639 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXA1P49639 AC009248.2-201ENST00000619826 254 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HOXA1P49639 AC022149.2-201ENST00000621061 203 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 AC068647.1-201ENST00000489539 2265 ntBASIC2.87□□□□□ -1.95
HOXA1P49639 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HOXA1P49639 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
HOXA1P49639 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HOXA1P49639 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HOXA1P49639 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
HOXA1P49639 RNU1-13P-201ENST00000384499 162 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 MIR578-201ENST00000384828 96 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 MIR30B-201ENST00000384850 88 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 RNA5SP118-201ENST00000410385 109 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 RNU6-387P-201ENST00000411331 105 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 PDCL2P1-201ENST00000419302 352 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 AC245054.1-201ENST00000420944 258 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXA1P49639 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXA1P49639 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 CECR9-201ENST00000453421 199 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 RN7SL75P-201ENST00000461926 281 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 RPL23AP67-201ENST00000465341 474 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 AC084357.1-201ENST00000473404 255 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 HMGN2P13-201ENST00000476476 274 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXA1P49639 AC139453.3-201ENST00000493276 369 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 SNORA70.19-201ENST00000516717 90 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 RNA5SP468-201ENST00000516782 93 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 TRMT10BP1-201ENST00000519377 943 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXA1P49639 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.86□□□□□ -1.95
HOXA1P49639 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXA1P49639 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.86□□□□□ -1.95
HOXA1P49639 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXA1P49639 AL357078.3-201ENST00000607528 618 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 AC009570.1-201ENST00000609599 745 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 AC063943.3-201ENST00000615562 356 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 ZYXP1-201ENST00000617638 118 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 AP003355.3-201ENST00000623465 114 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 AP003122.6-201ENST00000623831 495 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 MTND1P37-201ENST00000636562 264 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
HOXA1P49639 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HOXA1P49639 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
HOXA1P49639 AL161912.2-201ENST00000565707 3007 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 AC008568.2-201ENST00000623862 2313 ntBASIC2.86□□□□□ -1.95
HOXA1P49639 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HOXA1P49639 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HOXA1P49639 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HOXA1P49639 MIR372-201ENST00000362225 67 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HOXA1P49639 SNORA75B-201ENST00000384053 137 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 RNA5SP219-201ENST00000390940 113 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HOXA1P49639 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.85□□□□□ -1.95
HOXA1P49639 RNU4-26P-201ENST00000410270 107 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms