Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RPS3AP44-201ENST00000425466 790 ntBASIC1.97□□□□□ -2.09
RFC3P40938 AC104651.1-201ENST00000427559 735 ntBASIC1.97□□□□□ -2.09
RFC3P40938 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.97□□□□□ -2.09
RFC3P40938 FABP5P14-201ENST00000437273 393 ntBASIC1.97□□□□□ -2.09
RFC3P40938 AL117351.1-201ENST00000438864 766 ntBASIC1.97□□□□□ -2.09
RFC3P40938 snoU109.3-201ENST00000459477 145 ntBASIC1.97□□□□□ -2.09
RFC3P40938 KLF3P2-201ENST00000465138 268 ntBASIC1.97□□□□□ -2.09
RFC3P40938 AC022493.1-201ENST00000492984 337 ntBASIC1.97□□□□□ -2.09
RFC3P40938 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.97□□□□□ -2.09
RFC3P40938 AC134050.1-201ENST00000495088 933 ntBASIC1.97□□□□□ -2.09
RFC3P40938 AC106872.3-201ENST00000495104 446 ntBASIC1.97□□□□□ -2.09
RFC3P40938 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.97□□□□□ -2.09
RFC3P40938 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.97□□□□□ -2.09
RFC3P40938 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RFC3P40938 MIR892C-201ENST00000516410 77 ntBASIC1.97□□□□□ -2.09
RFC3P40938 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.97□□□□□ -2.09
RFC3P40938 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.97□□□□□ -2.09
RFC3P40938 AC105245.1-201ENST00000581934 244 ntBASIC1.97□□□□□ -2.09
RFC3P40938 AL450336.1-201ENST00000605180 586 ntBASIC1.97□□□□□ -2.09
RFC3P40938 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.97□□□□□ -2.09
RFC3P40938 MIR6132-201ENST00000622083 109 ntBASIC1.97□□□□□ -2.09
RFC3P40938 AC092125.1-201ENST00000562568 1995 ntBASIC1.97□□□□□ -2.09
RFC3P40938 AL359854.1-201ENST00000614203 1594 ntBASIC1.97□□□□□ -2.09
RFC3P40938 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RFC3P40938 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
RFC3P40938 NACAP2-201ENST00000318548 624 ntBASIC1.96□□□□□ -2.1
RFC3P40938 HSPE1P11-201ENST00000339579 310 ntBASIC1.96□□□□□ -2.1
RFC3P40938 OR56A5-201ENST00000340110 738 ntBASIC1.96□□□□□ -2.1
RFC3P40938 SNORD114-1-201ENST00000362705 72 ntBASIC1.96□□□□□ -2.1
RFC3P40938 RNU6-486P-201ENST00000363116 107 ntBASIC1.96□□□□□ -2.1
RFC3P40938 RNU6-19P-201ENST00000384718 107 ntBASIC1.96□□□□□ -2.1
RFC3P40938 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
RFC3P40938 GSTA9P-201ENST00000406231 611 ntBASIC1.96□□□□□ -2.1
RFC3P40938 AL355143.1-201ENST00000407101 841 ntBASIC1.96□□□□□ -2.1
RFC3P40938 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.96□□□□□ -2.1
RFC3P40938 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.96□□□□□ -2.1
RFC3P40938 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.96□□□□□ -2.1
RFC3P40938 HMGN2P3-201ENST00000433603 273 ntBASIC1.96□□□□□ -2.1
RFC3P40938 HMGN2P5-201ENST00000436882 273 ntBASIC1.96□□□□□ -2.1
RFC3P40938 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.96□□□□□ -2.1
RFC3P40938 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.96□□□□□ -2.1
RFC3P40938 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.96□□□□□ -2.1
RFC3P40938 MTATP6P14-201ENST00000455189 673 ntBASIC1.96□□□□□ -2.1
RFC3P40938 UBL5P3-201ENST00000475112 231 ntBASIC1.96□□□□□ -2.1
RFC3P40938 RPS27P21-201ENST00000486977 252 ntBASIC1.96□□□□□ -2.1
RFC3P40938 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RFC3P40938 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.96□□□□□ -2.1
RFC3P40938 MIR514B-201ENST00000516774 80 ntBASIC1.96□□□□□ -2.1
RFC3P40938 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.96□□□□□ -2.1
RFC3P40938 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.96□□□□□ -2.1
RFC3P40938 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
RFC3P40938 AL121821.2-201ENST00000556081 394 ntBASIC1.96□□□□□ -2.1
RFC3P40938 AL133241.1-201ENST00000556832 487 ntBASIC1.96□□□□□ -2.1
RFC3P40938 ROCK1P1-201ENST00000573767 549 ntBASIC1.96□□□□□ -2.1
RFC3P40938 AC136618.2-201ENST00000575091 400 ntBASIC1.96□□□□□ -2.1
RFC3P40938 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.96□□□□□ -2.1
RFC3P40938 AC068790.3-201ENST00000602988 553 ntBASIC1.96□□□□□ -2.1
RFC3P40938 AL158050.2-201ENST00000605336 568 ntBASIC1.96□□□□□ -2.1
RFC3P40938 AC080013.3-201ENST00000606839 578 ntBASIC1.96□□□□□ -2.1
RFC3P40938 AC072039.2-201ENST00000608883 439 ntBASIC1.96□□□□□ -2.1
RFC3P40938 AC024581.2-201ENST00000619986 252 ntBASIC1.96□□□□□ -2.1
RFC3P40938 AC098657.3-201ENST00000620434 263 ntBASIC1.96□□□□□ -2.1
RFC3P40938 KPNA2P1-201ENST00000458289 1591 ntBASIC1.96□□□□□ -2.1
RFC3P40938 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.96□□□□□ -2.1
RFC3P40938 HSPA8P4-201ENST00000511877 1920 ntBASIC1.95□□□□□ -2.1
RFC3P40938 RNA5SP432-201ENST00000362480 116 ntBASIC1.95□□□□□ -2.1
RFC3P40938 SNORA4.1-201ENST00000364263 144 ntBASIC1.95□□□□□ -2.1
RFC3P40938 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RFC3P40938 USP9YP6-201ENST00000413550 854 ntBASIC1.95□□□□□ -2.1
RFC3P40938 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.95□□□□□ -2.1
RFC3P40938 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.95□□□□□ -2.1
RFC3P40938 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.95□□□□□ -2.1
RFC3P40938 PTGES3P4-201ENST00000426243 356 ntBASIC1.95□□□□□ -2.1
RFC3P40938 HMGB1P27-201ENST00000431429 603 ntBASIC1.95□□□□□ -2.1
RFC3P40938 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.95□□□□□ -2.1
RFC3P40938 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.95□□□□□ -2.1
RFC3P40938 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.95□□□□□ -2.1
RFC3P40938 EXOSC3P1-201ENST00000448649 500 ntBASIC1.95□□□□□ -2.1
RFC3P40938 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.95□□□□□ -2.1
RFC3P40938 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.95□□□□□ -2.1
RFC3P40938 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
RFC3P40938 MTCYBP43-201ENST00000513621 740 ntBASIC1.95□□□□□ -2.1
RFC3P40938 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.95□□□□□ -2.1
RFC3P40938 SCARNA16.3-201ENST00000516595 184 ntBASIC1.95□□□□□ -2.1
RFC3P40938 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.95□□□□□ -2.1
RFC3P40938 AL138976.2-201ENST00000563989 694 ntBASIC1.95□□□□□ -2.1
RFC3P40938 AL391001.1-201ENST00000602747 715 ntBASIC1.95□□□□□ -2.1
RFC3P40938 AC097468.3-201ENST00000607956 456 ntBASIC1.95□□□□□ -2.1
RFC3P40938 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.95□□□□□ -2.1
RFC3P40938 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
RFC3P40938 AC009831.4-201ENST00000620744 325 ntBASIC1.95□□□□□ -2.1
RFC3P40938 AL136313.1-201ENST00000624804 202 ntBASIC1.95□□□□□ -2.1
RFC3P40938 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RFC3P40938 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.94□□□□□ -2.1
RFC3P40938 RNA5SP138-201ENST00000365098 114 ntBASIC1.94□□□□□ -2.1
RFC3P40938 RNU6-723P-201ENST00000383973 107 ntBASIC1.94□□□□□ -2.1
RFC3P40938 RNU6-278P-201ENST00000390945 109 ntBASIC1.94□□□□□ -2.1
RFC3P40938 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RFC3P40938 SNORD23.1-201ENST00000408212 104 ntBASIC1.94□□□□□ -2.1
RFC3P40938 PIGPP2-201ENST00000411569 458 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms