Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.18□□□□□ -1.9
USP8P40818 AC117440.1-201ENST00000474107 571 ntBASIC3.18□□□□□ -1.9
USP8P40818 MTAPP1-201ENST00000489154 819 ntBASIC3.18□□□□□ -1.9
USP8P40818 AL049874.1-201ENST00000489560 388 ntBASIC3.18□□□□□ -1.9
USP8P40818 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.18□□□□□ -1.9
USP8P40818 RNU2-10P-201ENST00000516375 211 ntBASIC3.18□□□□□ -1.9
USP8P40818 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USP8P40818 OR4R1P-201ENST00000529879 463 ntBASIC3.18□□□□□ -1.9
USP8P40818 AC104383.1-201ENST00000530297 370 ntBASIC3.18□□□□□ -1.9
USP8P40818 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USP8P40818 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.18□□□□□ -1.9
USP8P40818 HSPE1P20-201ENST00000538133 289 ntBASIC3.18□□□□□ -1.9
USP8P40818 AC004486.1-201ENST00000546846 233 ntBASIC3.18□□□□□ -1.9
USP8P40818 RPS3AP4-201ENST00000555161 764 ntBASIC3.18□□□□□ -1.9
USP8P40818 AC068135.2-201ENST00000569293 1028 ntBASIC3.18□□□□□ -1.9
USP8P40818 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.18□□□□□ -1.9
USP8P40818 SNORA59B-202ENST00000578183 701 ntBASIC3.18□□□□□ -1.9
USP8P40818 MIR3670-2-201ENST00000582974 65 ntBASIC3.18□□□□□ -1.9
USP8P40818 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.18□□□□□ -1.9
USP8P40818 MIR3670-1-201ENST00000584160 65 ntBASIC3.18□□□□□ -1.9
USP8P40818 MIR3670-3-201ENST00000584855 65 ntBASIC3.18□□□□□ -1.9
USP8P40818 AC007363.1-201ENST00000604736 620 ntBASIC3.18□□□□□ -1.9
USP8P40818 YPEL5P2-201ENST00000605553 359 ntBASIC3.18□□□□□ -1.9
USP8P40818 AP001330.5-201ENST00000607176 411 ntBASIC3.18□□□□□ -1.9
USP8P40818 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.18□□□□□ -1.9
USP8P40818 MIR3670-4-201ENST00000612260 65 ntBASIC3.18□□□□□ -1.9
USP8P40818 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.18□□□□□ -1.9
USP8P40818 SNHG22-203ENST00000617833 660 ntBASIC3.18□□□□□ -1.9
USP8P40818 AL360181.4-201ENST00000621752 134 ntBASIC3.18□□□□□ -1.9
USP8P40818 AC093648.1-201ENST00000623546 606 ntBASIC3.18□□□□□ -1.9
USP8P40818 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.18□□□□□ -1.9
USP8P40818 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
USP8P40818 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP8P40818 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP8P40818 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP8P40818 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
USP8P40818 AP003122.5-201ENST00000527668 3766 ntBASIC3.17□□□□□ -1.9
USP8P40818 AC073346.2-201ENST00000624724 2058 ntBASIC3.17□□□□□ -1.9
USP8P40818 Y_RNA.38-201ENST00000362617 102 ntBASIC3.17□□□□□ -1.9
USP8P40818 RNU6-1120P-201ENST00000362988 108 ntBASIC3.17□□□□□ -1.9
USP8P40818 RNU6-799P-201ENST00000363567 107 ntBASIC3.17□□□□□ -1.9
USP8P40818 RNU6-1097P-201ENST00000363586 107 ntBASIC3.17□□□□□ -1.9
USP8P40818 RNY4P14-201ENST00000363656 96 ntBASIC3.17□□□□□ -1.9
USP8P40818 SNORA62.1-201ENST00000364287 154 ntBASIC3.17□□□□□ -1.9
USP8P40818 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USP8P40818 RNU6-701P-201ENST00000384059 107 ntBASIC3.17□□□□□ -1.9
USP8P40818 MIR181B1-201ENST00000385240 110 ntBASIC3.17□□□□□ -1.9
USP8P40818 TXNP7-201ENST00000406296 293 ntBASIC3.17□□□□□ -1.9
USP8P40818 AC114491.1-201ENST00000416095 246 ntBASIC3.17□□□□□ -1.9
USP8P40818 MTND4LP11-201ENST00000422184 280 ntBASIC3.17□□□□□ -1.9
USP8P40818 AL671855.1-201ENST00000446875 1203 ntBASIC3.17□□□□□ -1.9
USP8P40818 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.17□□□□□ -1.9
USP8P40818 CACYBPP2-201ENST00000453625 678 ntBASIC3.17□□□□□ -1.9
USP8P40818 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.17□□□□□ -1.9
USP8P40818 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.17□□□□□ -1.9
USP8P40818 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.17□□□□□ -1.9
USP8P40818 RNU6-1281P-201ENST00000516223 105 ntBASIC3.17□□□□□ -1.9
USP8P40818 AP003072.2-201ENST00000527756 676 ntBASIC3.17□□□□□ -1.9
USP8P40818 AC109635.3-201ENST00000529536 185 ntBASIC3.17□□□□□ -1.9
USP8P40818 AP003034.1-201ENST00000534621 422 ntBASIC3.17□□□□□ -1.9
USP8P40818 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.17□□□□□ -1.9
USP8P40818 AL359212.1-201ENST00000556608 614 ntBASIC3.17□□□□□ -1.9
USP8P40818 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.17□□□□□ -1.9
USP8P40818 AC008752.3-201ENST00000588113 712 ntBASIC3.17□□□□□ -1.9
USP8P40818 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.17□□□□□ -1.9
USP8P40818 AC007179.3-201ENST00000604976 235 ntBASIC3.17□□□□□ -1.9
USP8P40818 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.17□□□□□ -1.9
USP8P40818 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.17□□□□□ -1.9
USP8P40818 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
USP8P40818 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP8P40818 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USP8P40818 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
USP8P40818 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP8P40818 MIR422A-201ENST00000362286 90 ntBASIC3.16□□□□□ -1.9
USP8P40818 RNU6-223P-201ENST00000362830 107 ntBASIC3.16□□□□□ -1.9
USP8P40818 Y_RNA.89-201ENST00000363031 102 ntBASIC3.16□□□□□ -1.9
USP8P40818 RNU6-173P-201ENST00000364215 104 ntBASIC3.16□□□□□ -1.9
USP8P40818 RNU6-534P-201ENST00000364877 106 ntBASIC3.16□□□□□ -1.9
USP8P40818 SMIM11P1-201ENST00000369586 178 ntBASIC3.16□□□□□ -1.9
USP8P40818 SNORA36C-201ENST00000384289 132 ntBASIC3.16□□□□□ -1.9
USP8P40818 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
USP8P40818 NDUFS5P1-201ENST00000405668 289 ntBASIC3.16□□□□□ -1.9
USP8P40818 U3.42-201ENST00000408746 214 ntBASIC3.16□□□□□ -1.9
USP8P40818 RNU2-39P-201ENST00000410604 198 ntBASIC3.16□□□□□ -1.9
USP8P40818 RNA5SP38-201ENST00000410750 119 ntBASIC3.16□□□□□ -1.9
USP8P40818 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.16□□□□□ -1.9
USP8P40818 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.16□□□□□ -1.9
USP8P40818 DUTP6-201ENST00000425573 462 ntBASIC3.16□□□□□ -1.9
USP8P40818 MED13P1-201ENST00000428342 171 ntBASIC3.16□□□□□ -1.9
USP8P40818 TIMM9P3-201ENST00000428659 274 ntBASIC3.16□□□□□ -1.9
USP8P40818 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.16□□□□□ -1.9
USP8P40818 AC000111.3-201ENST00000433478 193 ntBASIC3.16□□□□□ -1.9
USP8P40818 HMGB3P12-201ENST00000438745 556 ntBASIC3.16□□□□□ -1.9
USP8P40818 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.16□□□□□ -1.9
USP8P40818 MTND4P18-201ENST00000447010 465 ntBASIC3.16□□□□□ -1.9
USP8P40818 RPL23AP31-201ENST00000456160 467 ntBASIC3.16□□□□□ -1.9
USP8P40818 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.16□□□□□ -1.9
USP8P40818 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.16□□□□□ -1.9
USP8P40818 RPL27AP5-201ENST00000469428 449 ntBASIC3.16□□□□□ -1.9
USP8P40818 VN1R104P-201ENST00000505115 1009 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms