Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AL390208.1-201ENST00000605885 644 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 AC008443.7-201ENST00000622195 246 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.75□□□□□ -2.13
COL18A1P39060 MIR203B-201ENST00000636080 86 ntBASIC1.75□□□□□ -2.13
COL18A1P39060 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL18A1P39060 Y_RNA.36-201ENST00000362602 112 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 Y_RNA.178-201ENST00000363832 102 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 SNORA68.1-201ENST00000364537 132 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 USP9YP19-201ENST00000412165 485 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.74□□□□□ -2.13
COL18A1P39060 AL512844.2-201ENST00000433990 593 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 AL445687.1-201ENST00000439946 251 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 MTCYBP3-201ENST00000445588 1137 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 ARPC3P5-201ENST00000448802 534 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.74□□□□□ -2.13
COL18A1P39060 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.74□□□□□ -2.13
COL18A1P39060 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.74□□□□□ -2.13
COL18A1P39060 HMGB1P28-201ENST00000507778 552 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 AC093281.2-201ENST00000510153 597 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 RNA5SP61-201ENST00000516453 100 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 RNU6-1256P-201ENST00000516539 103 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 GLYCAM1-201ENST00000546596 285 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.74□□□□□ -2.13
COL18A1P39060 MIR5694-201ENST00000581190 76 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 AC013553.2-201ENST00000604244 589 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 AC069545.1-201ENST00000605671 358 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 AC024257.5-201ENST00000612739 531 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 AC091895.1-201ENST00000624494 256 ntBASIC1.74□□□□□ -2.13
COL18A1P39060 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.74□□□□□ -2.13
COL18A1P39060 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
COL18A1P39060 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
COL18A1P39060 AP000560.1-201ENST00000624150 1937 ntBASIC1.73□□□□□ -2.13
COL18A1P39060 CDC27P3-201ENST00000635418 1910 ntBASIC1.73□□□□□ -2.13
COL18A1P39060 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL18A1P39060 RNU6-1078P-201ENST00000364522 103 ntBASIC1.73□□□□□ -2.13
COL18A1P39060 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
COL18A1P39060 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.73□□□□□ -2.13
COL18A1P39060 USP9YP21-201ENST00000420603 432 ntBASIC1.73□□□□□ -2.13
COL18A1P39060 AC009296.1-201ENST00000443146 155 ntBASIC1.73□□□□□ -2.13
COL18A1P39060 BMI1P1-201ENST00000445879 941 ntBASIC1.73□□□□□ -2.13
COL18A1P39060 AP1S2P1-201ENST00000457344 379 ntBASIC1.73□□□□□ -2.13
COL18A1P39060 AL135752.1-201ENST00000479477 471 ntBASIC1.73□□□□□ -2.13
COL18A1P39060 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.73□□□□□ -2.13
COL18A1P39060 RNA5SP291-201ENST00000517222 105 ntBASIC1.73□□□□□ -2.13
COL18A1P39060 SLC2A13P1-201ENST00000531560 322 ntBASIC1.73□□□□□ -2.13
COL18A1P39060 AC092451.2-201ENST00000538746 658 ntBASIC1.73□□□□□ -2.13
COL18A1P39060 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.73□□□□□ -2.13
COL18A1P39060 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.73□□□□□ -2.13
COL18A1P39060 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
COL18A1P39060 AC013476.2-201ENST00000614456 459 ntBASIC1.73□□□□□ -2.13
COL18A1P39060 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.73□□□□□ -2.13
COL18A1P39060 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.73□□□□□ -2.13
COL18A1P39060 AL137003.2-201ENST00000606924 2538 ntBASIC1.73□□□□□ -2.13
COL18A1P39060 RNU6-1032P-201ENST00000384100 107 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 MIR548J-201ENST00000408833 112 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 MTND1P21-201ENST00000412991 285 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 USP9YP13-201ENST00000417797 480 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.72□□□□□ -2.13
COL18A1P39060 AL139421.1-201ENST00000423010 169 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 AC098614.2-201ENST00000426040 255 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 RPL35AP22-201ENST00000436855 335 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 MTND4LP16-201ENST00000440828 295 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.72□□□□□ -2.13
COL18A1P39060 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COL18A1P39060 AL049874.1-201ENST00000489560 388 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.72□□□□□ -2.13
COL18A1P39060 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.72□□□□□ -2.13
COL18A1P39060 RNU6-1225P-201ENST00000516336 65 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 RNA5SP471-201ENST00000516971 106 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.72□□□□□ -2.13
COL18A1P39060 AL132857.1-201ENST00000555180 708 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 AC090888.1-201ENST00000561335 1141 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.72□□□□□ -2.13
COL18A1P39060 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.72□□□□□ -2.13
COL18A1P39060 uc_338.20-201ENST00000621563 178 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 AC025048.6-202ENST00000627667 438 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
COL18A1P39060 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.72□□□□□ -2.13
COL18A1P39060 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
COL18A1P39060 RNA5SP363-201ENST00000365072 115 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 RNU6-359P-201ENST00000365466 108 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 RNU6-217P-201ENST00000384164 104 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.72□□□□□ -2.13
COL18A1P39060 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 AC138853.1-201ENST00000503549 823 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 AC016550.1-201ENST00000505348 785 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 AC093677.1-201ENST00000514414 678 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.72□□□□□ -2.13
COL18A1P39060 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.72□□□□□ -2.13
COL18A1P39060 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.72□□□□□ -2.13
COL18A1P39060 AC121758.2-201ENST00000553271 193 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.72□□□□□ -2.13
COL18A1P39060 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.72□□□□□ -2.13
COL18A1P39060 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.72□□□□□ -2.13
COL18A1P39060 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.72□□□□□ -2.13
COL18A1P39060 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.72□□□□□ -2.13
COL18A1P39060 AC068620.3-201ENST00000602749 560 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 AL355877.2-201ENST00000603670 358 ntBASIC1.72□□□□□ -2.13
COL18A1P39060 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL18A1P39060 AC083806.3-201ENST00000614016 455 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms