Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
BRCA1P38398 AC109445.1-201ENST00000512356 383 ntBASIC2.04□□□□□ -2.08
BRCA1P38398 AC110760.3-202ENST00000515177 371 ntBASIC2.04□□□□□ -2.08
BRCA1P38398 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.04□□□□□ -2.08
BRCA1P38398 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.04□□□□□ -2.08
BRCA1P38398 BNIP3P27-201ENST00000599991 412 ntBASIC2.04□□□□□ -2.08
BRCA1P38398 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
BRCA1P38398 AC012150.2-201ENST00000621300 544 ntBASIC2.04□□□□□ -2.08
BRCA1P38398 Y_RNA.327-201ENST00000365201 102 ntBASIC2.03□□□□□ -2.08
BRCA1P38398 Z98749.2-208ENST00000381646 500 ntBASIC2.03□□□□□ -2.08
BRCA1P38398 RNU6-516P-201ENST00000411381 104 ntBASIC2.03□□□□□ -2.08
BRCA1P38398 BPY2DP-201ENST00000422208 265 ntBASIC2.03□□□□□ -2.08
BRCA1P38398 AC021451.1-201ENST00000523498 1129 ntBASIC2.03□□□□□ -2.08
BRCA1P38398 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.03□□□□□ -2.08
BRCA1P38398 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.03□□□□□ -2.08
BRCA1P38398 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.03□□□□□ -2.08
BRCA1P38398 AC103710.4-201ENST00000609301 899 ntBASIC2.03□□□□□ -2.08
BRCA1P38398 AC008498.1-201ENST00000613012 531 ntBASIC2.03□□□□□ -2.08
BRCA1P38398 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.03□□□□□ -2.08
BRCA1P38398 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
BRCA1P38398 RNU6-97P-201ENST00000363387 104 ntBASIC2.03□□□□□ -2.09
BRCA1P38398 MIR320C1-201ENST00000408566 88 ntBASIC2.03□□□□□ -2.09
BRCA1P38398 GTF2IP3-201ENST00000433887 494 ntBASIC2.03□□□□□ -2.09
BRCA1P38398 AL139109.1-201ENST00000455491 297 ntBASIC2.03□□□□□ -2.09
BRCA1P38398 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.03□□□□□ -2.09
BRCA1P38398 RNU6-276P-201ENST00000516114 96 ntBASIC2.03□□□□□ -2.09
BRCA1P38398 SUB1P1-201ENST00000524415 382 ntBASIC2.03□□□□□ -2.09
BRCA1P38398 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.03□□□□□ -2.09
BRCA1P38398 AC008015.1-201ENST00000555505 465 ntBASIC2.03□□□□□ -2.09
BRCA1P38398 APOOP1-201ENST00000604695 592 ntBASIC2.03□□□□□ -2.09
BRCA1P38398 AC239868.4-201ENST00000608318 671 ntBASIC2.03□□□□□ -2.09
BRCA1P38398 AP002371.2-201ENST00000624450 503 ntBASIC2.03□□□□□ -2.09
BRCA1P38398 MIR7515-201ENST00000637837 67 ntBASIC2.03□□□□□ -2.09
BRCA1P38398 AC010889.1-201ENST00000566193 2666 ntBASIC2.03□□□□□ -2.09
BRCA1P38398 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.02□□□□□ -2.09
BRCA1P38398 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
BRCA1P38398 MIR613-201ENST00000385248 95 ntBASIC2.02□□□□□ -2.09
BRCA1P38398 AC023141.4-201ENST00000412031 328 ntBASIC2.02□□□□□ -2.09
BRCA1P38398 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.02□□□□□ -2.09
BRCA1P38398 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.02□□□□□ -2.09
BRCA1P38398 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.02□□□□□ -2.09
BRCA1P38398 EEF1E1P1-201ENST00000446998 430 ntBASIC2.02□□□□□ -2.09
BRCA1P38398 MTATP6P7-201ENST00000453315 681 ntBASIC2.02□□□□□ -2.09
BRCA1P38398 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.02□□□□□ -2.09
BRCA1P38398 AC007115.1-201ENST00000546853 234 ntBASIC2.02□□□□□ -2.09
BRCA1P38398 ZNF876P-202ENST00000398732 1485 ntBASIC2.02□□□□□ -2.09
BRCA1P38398 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 RNU6-174P-201ENST00000410406 106 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 NDUFS5P4-201ENST00000412983 318 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 RPL17P12-201ENST00000413391 526 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.01□□□□□ -2.09
BRCA1P38398 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.01□□□□□ -2.09
BRCA1P38398 MTND1P23-201ENST00000416931 372 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 BX510359.4-201ENST00000423750 193 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 BX119904.4-201ENST00000424402 301 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.01□□□□□ -2.09
BRCA1P38398 COX6CP12-201ENST00000446748 202 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
BRCA1P38398 ATP5J2P3-201ENST00000451550 258 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 AL021397.1-201ENST00000451806 248 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 RPF2P2-201ENST00000504693 896 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 AC034244.1-201ENST00000507687 207 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.01□□□□□ -2.09
BRCA1P38398 RNU1-40P-201ENST00000516816 164 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 RNU1-97P-201ENST00000516872 164 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 AC091163.3-201ENST00000518269 1144 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 AP002748.2-201ENST00000528671 348 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
BRCA1P38398 MIR4419B-201ENST00000577260 68 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.01□□□□□ -2.09
BRCA1P38398 AL359740.1-201ENST00000624340 592 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 MIR7157-201ENST00000635801 60 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
BRCA1P38398 AC011477.1-204ENST00000623416 1325 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 RNA5SP393-201ENST00000363423 117 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 U3.20-201ENST00000390909 217 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 RPS3AP37-201ENST00000419176 745 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 AL953862.1-201ENST00000423016 168 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 C1DP1-201ENST00000426049 402 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 AL031659.1-201ENST00000447075 539 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 DPPA3P1-201ENST00000448050 469 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 RPL21P134-201ENST00000453468 483 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 RPL31P41-201ENST00000477967 372 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 RPS15AP36-201ENST00000492022 382 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 SCARNA11.3-201ENST00000517276 130 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 MTND1P36-201ENST00000522384 936 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.01□□□□□ -2.09
BRCA1P38398 AC025594.3-201ENST00000613068 790 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 SDR42E1P2-201ENST00000614861 481 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 AC245884.12-201ENST00000615364 59 ntBASIC2.01□□□□□ -2.09
BRCA1P38398 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.01□□□□□ -2.09
BRCA1P38398 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.01□□□□□ -2.09
BRCA1P38398 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
BRCA1P38398 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
BRCA1P38398 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2□□□□□ -2.09
BRCA1P38398 SNORA38-201ENST00000363946 132 ntBASIC2□□□□□ -2.09
BRCA1P38398 RNU6-60P-201ENST00000364792 103 ntBASIC2□□□□□ -2.09
BRCA1P38398 ELOCP14-201ENST00000428070 331 ntBASIC2□□□□□ -2.09
BRCA1P38398 AP000949.1-201ENST00000438328 629 ntBASIC2□□□□□ -2.09
BRCA1P38398 ELOCP7-201ENST00000439968 331 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms