Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GPC1P35052 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GPC1P35052 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GPC1P35052 DEFB108F-201ENST00000344638 222 ntBASIC4.85□□□□□ -1.63
GPC1P35052 U3.3-201ENST00000362986 216 ntBASIC4.85□□□□□ -1.63
GPC1P35052 Y_RNA.182-201ENST00000363880 111 ntBASIC4.85□□□□□ -1.63
GPC1P35052 RNU4-84P-201ENST00000364200 139 ntBASIC4.85□□□□□ -1.63
GPC1P35052 RNU6-312P-201ENST00000364629 107 ntBASIC4.85□□□□□ -1.63
GPC1P35052 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.85□□□□□ -1.63
GPC1P35052 Y_RNA.412-201ENST00000384001 104 ntBASIC4.85□□□□□ -1.63
GPC1P35052 MIR329-1-201ENST00000385028 80 ntBASIC4.85□□□□□ -1.63
GPC1P35052 MIR569-201ENST00000385228 96 ntBASIC4.85□□□□□ -1.63
GPC1P35052 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
GPC1P35052 SNORA40.19-201ENST00000390846 128 ntBASIC4.85□□□□□ -1.63
GPC1P35052 Z85995.1-201ENST00000415547 335 ntBASIC4.85□□□□□ -1.63
GPC1P35052 CYP4F29P-201ENST00000420685 446 ntBASIC4.85□□□□□ -1.63
GPC1P35052 AC108075.1-201ENST00000424692 529 ntBASIC4.85□□□□□ -1.63
GPC1P35052 AC009238.2-201ENST00000431026 355 ntBASIC4.85□□□□□ -1.63
GPC1P35052 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.85□□□□□ -1.63
GPC1P35052 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.85□□□□□ -1.63
GPC1P35052 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.85□□□□□ -1.63
GPC1P35052 AC010409.1-201ENST00000487382 476 ntBASIC4.85□□□□□ -1.63
GPC1P35052 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.85□□□□□ -1.63
GPC1P35052 AC091874.1-201ENST00000511402 339 ntBASIC4.85□□□□□ -1.63
GPC1P35052 AC108043.1-201ENST00000512696 574 ntBASIC4.85□□□□□ -1.63
GPC1P35052 SCARNA15.2-201ENST00000516409 127 ntBASIC4.85□□□□□ -1.63
GPC1P35052 TGIF1P1-201ENST00000558095 802 ntBASIC4.85□□□□□ -1.63
GPC1P35052 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.85□□□□□ -1.63
GPC1P35052 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.85□□□□□ -1.63
GPC1P35052 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.85□□□□□ -1.63
GPC1P35052 SCARNA4-202ENST00000625402 129 ntBASIC4.85□□□□□ -1.63
GPC1P35052 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.85□□□□□ -1.63
GPC1P35052 BMS1P21-201ENST00000634565 365 ntBASIC4.85□□□□□ -1.63
GPC1P35052 U6.99-201ENST00000637524 83 ntBASIC4.85□□□□□ -1.63
GPC1P35052 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
GPC1P35052 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GPC1P35052 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
GPC1P35052 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
GPC1P35052 AP001642.1-201ENST00000624727 2117 ntBASIC4.85□□□□□ -1.63
GPC1P35052 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
GPC1P35052 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GPC1P35052 NEAT1-202ENST00000501122 22743 ntBASIC4.85□□□□□ -1.63
GPC1P35052 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
GPC1P35052 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GPC1P35052 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
GPC1P35052 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
GPC1P35052 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
GPC1P35052 RNU4-80P-201ENST00000363200 141 ntBASIC4.84□□□□□ -1.63
GPC1P35052 SNORA72.2-201ENST00000365028 127 ntBASIC4.84□□□□□ -1.63
GPC1P35052 RNU6-356P-201ENST00000384140 107 ntBASIC4.84□□□□□ -1.63
GPC1P35052 SNORA29-201ENST00000384183 140 ntBASIC4.84□□□□□ -1.63
GPC1P35052 RPL7AP25-201ENST00000423357 805 ntBASIC4.84□□□□□ -1.63
GPC1P35052 AC005154.2-201ENST00000438110 379 ntBASIC4.84□□□□□ -1.63
GPC1P35052 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.84□□□□□ -1.63
GPC1P35052 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.84□□□□□ -1.63
GPC1P35052 RN7SL443P-201ENST00000464331 290 ntBASIC4.84□□□□□ -1.63
GPC1P35052 RPS27AP9-201ENST00000477681 438 ntBASIC4.84□□□□□ -1.63
GPC1P35052 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.84□□□□□ -1.63
GPC1P35052 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.84□□□□□ -1.63
GPC1P35052 MIR3145-201ENST00000580727 82 ntBASIC4.84□□□□□ -1.63
GPC1P35052 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.84□□□□□ -1.63
GPC1P35052 AC007448.1-201ENST00000582714 234 ntBASIC4.84□□□□□ -1.63
GPC1P35052 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.84□□□□□ -1.63
GPC1P35052 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.84□□□□□ -1.63
GPC1P35052 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.84□□□□□ -1.63
GPC1P35052 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.84□□□□□ -1.63
GPC1P35052 AC027309.3-201ENST00000623419 351 ntBASIC4.84□□□□□ -1.63
GPC1P35052 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GPC1P35052 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GPC1P35052 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.84□□□□□ -1.63
GPC1P35052 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GPC1P35052 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.84□□□□□ -1.64
GPC1P35052 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
GPC1P35052 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
GPC1P35052 AC099654.2-201ENST00000433031 1980 ntBASIC4.84□□□□□ -1.64
GPC1P35052 AC010332.2-201ENST00000613083 1904 ntBASIC4.84□□□□□ -1.64
GPC1P35052 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.83□□□□□ -1.64
GPC1P35052 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.83□□□□□ -1.64
GPC1P35052 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GPC1P35052 AL672167.1-204ENST00000641875 3017 ntBASIC4.83□□□□□ -1.64
GPC1P35052 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
GPC1P35052 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GPC1P35052 Y_RNA.23-201ENST00000362496 106 ntBASIC4.83□□□□□ -1.64
GPC1P35052 RN7SKP113-201ENST00000363891 295 ntBASIC4.83□□□□□ -1.64
GPC1P35052 RNU6-153P-201ENST00000364422 104 ntBASIC4.83□□□□□ -1.64
GPC1P35052 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
GPC1P35052 MIR487A-201ENST00000385009 80 ntBASIC4.83□□□□□ -1.64
GPC1P35052 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GPC1P35052 SNORA11B-201ENST00000408175 129 ntBASIC4.83□□□□□ -1.64
GPC1P35052 COX6CP13-201ENST00000428703 226 ntBASIC4.83□□□□□ -1.64
GPC1P35052 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.83□□□□□ -1.64
GPC1P35052 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.83□□□□□ -1.64
GPC1P35052 AC005042.3-201ENST00000453230 174 ntBASIC4.83□□□□□ -1.64
GPC1P35052 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.83□□□□□ -1.64
GPC1P35052 AC022795.1-201ENST00000473808 480 ntBASIC4.83□□□□□ -1.64
GPC1P35052 RN7SL214P-201ENST00000487317 265 ntBASIC4.83□□□□□ -1.64
GPC1P35052 RNU6-1333P-201ENST00000516162 93 ntBASIC4.83□□□□□ -1.64
GPC1P35052 AL161713.1-201ENST00000555538 145 ntBASIC4.83□□□□□ -1.64
GPC1P35052 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.83□□□□□ -1.64
GPC1P35052 AC233702.2-202ENST00000562547 291 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms