Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.17□□□□□ -1.58
VARSP26640 AC099669.2-201ENST00000616549 437 ntBASIC5.17□□□□□ -1.58
VARSP26640 AC241585.2-209ENST00000638217 143 ntBASIC5.17□□□□□ -1.58
VARSP26640 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VARSP26640 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VARSP26640 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VARSP26640 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VARSP26640 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.17□□□□□ -1.58
VARSP26640 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
VARSP26640 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VARSP26640 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
VARSP26640 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VARSP26640 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VARSP26640 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
VARSP26640 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.16□□□□□ -1.58
VARSP26640 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VARSP26640 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VARSP26640 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
VARSP26640 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.16□□□□□ -1.58
VARSP26640 AL353743.1-202ENST00000431724 1695 ntBASIC5.16□□□□□ -1.58
VARSP26640 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VARSP26640 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.16□□□□□ -1.58
VARSP26640 FTLP6-201ENST00000355274 422 ntBASIC5.16□□□□□ -1.58
VARSP26640 RNU4-80P-201ENST00000363200 141 ntBASIC5.16□□□□□ -1.58
VARSP26640 RNU6-80P-201ENST00000384195 107 ntBASIC5.16□□□□□ -1.58
VARSP26640 RNU6-1145P-201ENST00000384246 107 ntBASIC5.16□□□□□ -1.58
VARSP26640 SNORA20-201ENST00000384662 132 ntBASIC5.16□□□□□ -1.58
VARSP26640 MIR153-1-201ENST00000384914 90 ntBASIC5.16□□□□□ -1.58
VARSP26640 RN7SKP216-201ENST00000411050 312 ntBASIC5.16□□□□□ -1.58
VARSP26640 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.16□□□□□ -1.58
VARSP26640 RPL7AP25-201ENST00000423357 805 ntBASIC5.16□□□□□ -1.58
VARSP26640 CKS1BP5-201ENST00000434172 273 ntBASIC5.16□□□□□ -1.58
VARSP26640 AC005154.2-201ENST00000438110 379 ntBASIC5.16□□□□□ -1.58
VARSP26640 AC005042.3-201ENST00000453230 174 ntBASIC5.16□□□□□ -1.58
VARSP26640 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.16□□□□□ -1.58
VARSP26640 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.16□□□□□ -1.58
VARSP26640 AC020890.1-201ENST00000491837 504 ntBASIC5.16□□□□□ -1.58
VARSP26640 RNU6-191P-201ENST00000516295 94 ntBASIC5.16□□□□□ -1.58
VARSP26640 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.16□□□□□ -1.58
VARSP26640 MIR3145-201ENST00000580727 82 ntBASIC5.16□□□□□ -1.58
VARSP26640 AC069307.1-201ENST00000602820 447 ntBASIC5.16□□□□□ -1.58
VARSP26640 AC109583.2-201ENST00000617367 129 ntBASIC5.16□□□□□ -1.58
VARSP26640 MIR6715B-201ENST00000637172 77 ntBASIC5.16□□□□□ -1.58
VARSP26640 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VARSP26640 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VARSP26640 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
VARSP26640 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.16□□□□□ -1.58
VARSP26640 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VARSP26640 AC092593.1-201ENST00000515413 1815 ntBASIC5.16□□□□□ -1.58
VARSP26640 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
VARSP26640 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
VARSP26640 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
VARSP26640 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.15□□□□□ -1.58
VARSP26640 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.15□□□□□ -1.58
VARSP26640 Y_RNA.121-201ENST00000363309 113 ntBASIC5.15□□□□□ -1.59
VARSP26640 RNA5SP197-201ENST00000363357 119 ntBASIC5.15□□□□□ -1.59
VARSP26640 RNU6-527P-201ENST00000363425 104 ntBASIC5.15□□□□□ -1.59
VARSP26640 Y_RNA.319-201ENST00000365138 92 ntBASIC5.15□□□□□ -1.59
VARSP26640 RNA5SP44-201ENST00000410446 133 ntBASIC5.15□□□□□ -1.59
VARSP26640 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.15□□□□□ -1.59
VARSP26640 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.15□□□□□ -1.59
VARSP26640 RPL30P13-201ENST00000418873 348 ntBASIC5.15□□□□□ -1.59
VARSP26640 EIF1AXP1-201ENST00000419267 435 ntBASIC5.15□□□□□ -1.59
VARSP26640 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.15□□□□□ -1.59
VARSP26640 BTF3P11-201ENST00000426582 477 ntBASIC5.15□□□□□ -1.59
VARSP26640 AC079780.1-201ENST00000428259 207 ntBASIC5.15□□□□□ -1.59
VARSP26640 RPS15AP5-201ENST00000436276 388 ntBASIC5.15□□□□□ -1.59
VARSP26640 AL078601.1-201ENST00000444542 271 ntBASIC5.15□□□□□ -1.59
VARSP26640 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.15□□□□□ -1.59
VARSP26640 AC072052.1-201ENST00000496556 306 ntBASIC5.15□□□□□ -1.59
VARSP26640 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.15□□□□□ -1.59
VARSP26640 RNA5SP290-201ENST00000517133 127 ntBASIC5.15□□□□□ -1.59
VARSP26640 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.15□□□□□ -1.59
VARSP26640 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.15□□□□□ -1.59
VARSP26640 AL008718.3-201ENST00000610217 321 ntBASIC5.15□□□□□ -1.59
VARSP26640 MIR6820-201ENST00000611508 62 ntBASIC5.15□□□□□ -1.59
VARSP26640 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
VARSP26640 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VARSP26640 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
VARSP26640 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
VARSP26640 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VARSP26640 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
VARSP26640 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VARSP26640 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
VARSP26640 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VARSP26640 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VARSP26640 AP001273.1-201ENST00000624493 3152 ntBASIC5.14□□□□□ -1.59
VARSP26640 RNU4-17P-201ENST00000365598 141 ntBASIC5.14□□□□□ -1.59
VARSP26640 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VARSP26640 ELOCP19-201ENST00000411919 318 ntBASIC5.14□□□□□ -1.59
VARSP26640 AC006466.1-201ENST00000438721 289 ntBASIC5.14□□□□□ -1.59
VARSP26640 Z82210.1-201ENST00000440037 231 ntBASIC5.14□□□□□ -1.59
VARSP26640 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.14□□□□□ -1.59
VARSP26640 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.14□□□□□ -1.59
VARSP26640 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.14□□□□□ -1.59
VARSP26640 ANP32BP2-201ENST00000454525 545 ntBASIC5.14□□□□□ -1.59
VARSP26640 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.14□□□□□ -1.59
VARSP26640 RNA5SP165-201ENST00000517142 115 ntBASIC5.14□□□□□ -1.59
VARSP26640 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.14□□□□□ -1.59
VARSP26640 AP002001.1-203ENST00000534002 267 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms