Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPN1P18031 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPN1P18031 MTND5P30-201ENST00000452896 1731 ntBASIC4.11□□□□□ -1.75
PTPN1P18031 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN1P18031 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN1P18031 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PTPN1P18031 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PTPN1P18031 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN1P18031 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN1P18031 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
PTPN1P18031 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN1P18031 RNU6-1167P-201ENST00000363227 94 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 Y_RNA.463-201ENST00000384271 102 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 MIR3074-201ENST00000384885 81 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 MIR301A-201ENST00000385261 86 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 MIR199A2-201ENST00000385289 110 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 AL356057.3-201ENST00000402607 340 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 RNA5SP239-201ENST00000410218 129 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 RNU6-607P-201ENST00000411283 108 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 CYCSP19-201ENST00000411715 316 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 MCFD2P1-201ENST00000417812 300 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 AL353621.1-201ENST00000418219 243 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN1P18031 HMGB1P9-201ENST00000429856 646 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN1P18031 RPL21P23-201ENST00000446654 460 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 RPL23AP31-201ENST00000456160 467 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 snoU13.24-201ENST00000458998 104 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.1□□□□□ -1.75
PTPN1P18031 AC008716.1-201ENST00000511084 513 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN1P18031 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.1□□□□□ -1.75
PTPN1P18031 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN1P18031 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN1P18031 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.1□□□□□ -1.75
PTPN1P18031 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.1□□□□□ -1.75
PTPN1P18031 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN1P18031 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN1P18031 ELOCP5-201ENST00000604924 333 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 HMGB1P50-201ENST00000605814 607 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPN1P18031 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PTPN1P18031 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN1P18031 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PTPN1P18031 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN1P18031 LINC02471-203ENST00000641941 4752 ntBASIC4.1□□□□□ -1.75
PTPN1P18031 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPN1P18031 AC005183.1-201ENST00000603687 1979 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTPN1P18031 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTPN1P18031 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.09□□□□□ -1.75
PTPN1P18031 Y_RNA.252-201ENST00000364556 101 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 RNU6-1329P-201ENST00000365664 107 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 RNU6-1032P-201ENST00000384100 107 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 RNU6-1179P-201ENST00000384667 107 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 RNU6-1105P-201ENST00000384774 107 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 RN7SKP156-201ENST00000410308 342 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 AC091390.3-201ENST00000426478 338 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 USP9YP30-201ENST00000430729 455 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 AC011742.1-201ENST00000431448 434 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPN1P18031 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPN1P18031 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPN1P18031 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPN1P18031 AC026726.1-201ENST00000512859 601 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 SCARNA15.2-201ENST00000516409 127 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 SCARNA14-201ENST00000516903 136 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 RNU6-1137P-201ENST00000517073 99 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTPN1P18031 AC022695.1-201ENST00000522089 237 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.09□□□□□ -1.75
PTPN1P18031 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPN1P18031 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTPN1P18031 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
PTPN1P18031 MED28P6-201ENST00000558776 231 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 AL360157.1-201ENST00000565962 87 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 MIR3921-201ENST00000577308 85 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 MIR1273C-201ENST00000578669 77 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 MIR3671-201ENST00000580455 88 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 AC011494.1-201ENST00000596454 237 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 AL161798.1-201ENST00000604630 131 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 AC103858.2-201ENST00000621471 543 ntBASIC4.09□□□□□ -1.75
PTPN1P18031 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPN1P18031 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPN1P18031 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPN1P18031 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPN1P18031 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
PTPN1P18031 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PTPN1P18031 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTPN1P18031 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPN1P18031 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
PTPN1P18031 Y_RNA.133-201ENST00000363428 110 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 RNU6-1181P-201ENST00000384191 106 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 RNU6-1106P-201ENST00000390845 107 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 SNORA48.7-201ENST00000391302 135 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 RNU2-3P-201ENST00000410144 191 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.08□□□□□ -1.76
PTPN1P18031 AL358176.2-201ENST00000425769 204 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms