Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RNU6-214P-201ENST00000384130 107 ntBASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 RNU6-1181P-201ENST00000384191 106 ntBASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 PCNPP3-201ENST00000393579 471 ntBASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 AL139109.1-201ENST00000455491 297 ntBASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 AC011005.2-201ENST00000487324 359 ntBASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 RPL17P19-201ENST00000489069 552 ntBASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 AP003733.2-201ENST00000529409 171 ntBASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 AC120057.2-201ENST00000571520 271 ntBASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 AC002545.1-201ENST00000592511 181 ntBASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 AC130454.1-201ENST00000622948 401 ntBASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 MAPK10-286ENST00000641208 8747 ntBASIC5.63□□□□□ -1.51
CSB-PGBD3P0DP91 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 UBE2L2-201ENST00000254302 429 ntBASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 Y_RNA.48-201ENST00000362710 103 ntBASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 RNU6-280P-201ENST00000364145 104 ntBASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 Y_RNA.577-201ENST00000384794 101 ntBASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 AL138885.1-201ENST00000405921 675 ntBASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 SYF2P2-201ENST00000417620 583 ntBASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 AL133547.1-201ENST00000448546 220 ntBASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 LINC01399-202ENST00000458450 244 ntBASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 RPS29P19-201ENST00000479709 171 ntBASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 HMGB3P16-201ENST00000508037 287 ntBASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 AC022655.2-201ENST00000577280 318 ntBASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 MIR5692A1-201ENST00000580523 69 ntBASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 AC016588.2-201ENST00000632484 3021 ntBASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 AL731532.2-201ENST00000623542 1953 ntBASIC5.62□□□□□ -1.51
CSB-PGBD3P0DP91 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 RNA5SP52-201ENST00000362448 134 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 RNA5SP307-201ENST00000362863 116 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 RNU6-371P-201ENST00000364283 108 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 RNA5SP151-201ENST00000365632 117 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 RNU6-1279P-201ENST00000383917 103 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 Y_RNA.534-201ENST00000384599 112 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 RNU2-33P-201ENST00000410344 192 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 CTSL3P-202ENST00000412179 788 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 RPL21P90-201ENST00000415692 466 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 EI24P1-201ENST00000416584 867 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 RPL21P38-201ENST00000418090 167 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 AL645568.3-201ENST00000433683 316 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 AL500522.2-201ENST00000448562 343 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 RPL23AP31-201ENST00000456160 467 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 AC087588.1-201ENST00000462203 316 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 APOOP4-201ENST00000513530 597 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 RNA5SP446-201ENST00000515955 82 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 RNU6-255P-201ENST00000516957 105 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 ZNF285B-201ENST00000561698 1767 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 ELOCP5-201ENST00000604924 333 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 AC064801.1-201ENST00000612025 407 ntBASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.61□□□□□ -1.51
CSB-PGBD3P0DP91 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 Y_RNA.297-201ENST00000364950 91 ntBASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 RNU6-662P-201ENST00000384253 104 ntBASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 SNORA51.11-201ENST00000384442 131 ntBASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 RNU6-121P-201ENST00000410525 99 ntBASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 SNORA74C-2-201ENST00000411179 201 ntBASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 CRYBB2P1-203ENST00000415709 538 ntBASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 YME1L1P1-201ENST00000429435 297 ntBASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 HMGN2P21-201ENST00000447764 270 ntBASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 RNA5SP246-201ENST00000458909 119 ntBASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 RPS15AP34-201ENST00000487776 387 ntBASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 AC007991.1-201ENST00000522680 631 ntBASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.6□□□□□ -1.51
CSB-PGBD3P0DP91 MED28P6-201ENST00000558776 231 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms