Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RNU6-678P-201ENST00000516832 109 ntBASIC2.27□□□□□ -2.05
RETP07949 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.27□□□□□ -2.05
RETP07949 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.27□□□□□ -2.05
RETP07949 MTCYBP20-201ENST00000524239 1129 ntBASIC2.27□□□□□ -2.05
RETP07949 AP002748.2-201ENST00000528671 348 ntBASIC2.27□□□□□ -2.05
RETP07949 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.27□□□□□ -2.05
RETP07949 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.27□□□□□ -2.05
RETP07949 AC124947.2-202ENST00000552735 133 ntBASIC2.27□□□□□ -2.05
RETP07949 AC078814.3-201ENST00000553036 491 ntBASIC2.27□□□□□ -2.05
RETP07949 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.27□□□□□ -2.05
RETP07949 AC023824.2-201ENST00000566185 400 ntBASIC2.27□□□□□ -2.05
RETP07949 AC145350.1-201ENST00000567426 208 ntBASIC2.27□□□□□ -2.05
RETP07949 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.27□□□□□ -2.05
RETP07949 AP000811.1-201ENST00000603803 651 ntBASIC2.27□□□□□ -2.05
RETP07949 AC018714.1-201ENST00000605028 208 ntBASIC2.27□□□□□ -2.05
RETP07949 AC005332.10-201ENST00000612725 619 ntBASIC2.27□□□□□ -2.05
RETP07949 AL031667.3-201ENST00000620124 655 ntBASIC2.27□□□□□ -2.05
RETP07949 AL356596.1-201ENST00000624230 379 ntBASIC2.27□□□□□ -2.05
RETP07949 AC019226.1-201ENST00000625666 515 ntBASIC2.27□□□□□ -2.05
RETP07949 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RETP07949 AC007785.2-201ENST00000598627 1916 ntBASIC2.27□□□□□ -2.05
RETP07949 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
RETP07949 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RETP07949 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.26□□□□□ -2.05
RETP07949 RNU6-433P-201ENST00000363216 104 ntBASIC2.26□□□□□ -2.05
RETP07949 Y_RNA.302-201ENST00000364997 102 ntBASIC2.26□□□□□ -2.05
RETP07949 RNU6-359P-201ENST00000365466 108 ntBASIC2.26□□□□□ -2.05
RETP07949 AL049545.1-201ENST00000401856 572 ntBASIC2.26□□□□□ -2.05
RETP07949 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.26□□□□□ -2.05
RETP07949 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.26□□□□□ -2.05
RETP07949 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.26□□□□□ -2.05
RETP07949 UBE2FP1-201ENST00000416536 447 ntBASIC2.26□□□□□ -2.05
RETP07949 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.26□□□□□ -2.05
RETP07949 AC011233.1-201ENST00000422812 283 ntBASIC2.26□□□□□ -2.05
RETP07949 AL593851.1-201ENST00000426171 157 ntBASIC2.26□□□□□ -2.05
RETP07949 AC007560.1-201ENST00000426912 237 ntBASIC2.26□□□□□ -2.05
RETP07949 MTND1P20-201ENST00000430341 950 ntBASIC2.26□□□□□ -2.05
RETP07949 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.26□□□□□ -2.05
RETP07949 RPL7P54-201ENST00000438336 674 ntBASIC2.26□□□□□ -2.05
RETP07949 BMI1P1-201ENST00000445879 941 ntBASIC2.26□□□□□ -2.05
RETP07949 AL031659.1-201ENST00000447075 539 ntBASIC2.26□□□□□ -2.05
RETP07949 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.26□□□□□ -2.05
RETP07949 RPS15AP27-201ENST00000449183 343 ntBASIC2.26□□□□□ -2.05
RETP07949 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.26□□□□□ -2.05
RETP07949 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.26□□□□□ -2.05
RETP07949 RPS3AP22-201ENST00000488297 769 ntBASIC2.26□□□□□ -2.05
RETP07949 EIF4EP3-201ENST00000498782 656 ntBASIC2.26□□□□□ -2.05
RETP07949 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.26□□□□□ -2.05
RETP07949 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.26□□□□□ -2.05
RETP07949 AC022447.3-201ENST00000506865 495 ntBASIC2.26□□□□□ -2.05
RETP07949 AC093809.1-201ENST00000509155 340 ntBASIC2.26□□□□□ -2.05
RETP07949 LTV1P1-201ENST00000510683 1237 ntBASIC2.26□□□□□ -2.05
RETP07949 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.26□□□□□ -2.05
RETP07949 MIR514B-201ENST00000516774 80 ntBASIC2.26□□□□□ -2.05
RETP07949 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.26□□□□□ -2.05
RETP07949 GLYCAM1-201ENST00000546596 285 ntBASIC2.26□□□□□ -2.05
RETP07949 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.26□□□□□ -2.05
RETP07949 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.26□□□□□ -2.05
RETP07949 MIR4781-201ENST00000585250 76 ntBASIC2.26□□□□□ -2.05
RETP07949 UBE2L4-201ENST00000587688 464 ntBASIC2.26□□□□□ -2.05
RETP07949 AC005498.1-201ENST00000592125 465 ntBASIC2.26□□□□□ -2.05
RETP07949 AC011494.1-201ENST00000596454 237 ntBASIC2.26□□□□□ -2.05
RETP07949 AC008751.2-201ENST00000597885 980 ntBASIC2.26□□□□□ -2.05
RETP07949 AC018638.7-201ENST00000605836 1114 ntBASIC2.26□□□□□ -2.05
RETP07949 AC072039.2-201ENST00000608883 439 ntBASIC2.26□□□□□ -2.05
RETP07949 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.26□□□□□ -2.05
RETP07949 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.26□□□□□ -2.05
RETP07949 AL158801.5-201ENST00000623123 465 ntBASIC2.26□□□□□ -2.05
RETP07949 AC112204.3-201ENST00000623822 332 ntBASIC2.26□□□□□ -2.05
RETP07949 AC012640.5-201ENST00000623897 319 ntBASIC2.26□□□□□ -2.05
RETP07949 AC120349.3-201ENST00000624377 529 ntBASIC2.26□□□□□ -2.05
RETP07949 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.26□□□□□ -2.05
RETP07949 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RETP07949 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RETP07949 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
RETP07949 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RETP07949 RNU1-17P-201ENST00000363022 152 ntBASIC2.25□□□□□ -2.05
RETP07949 RNU5A-2P-201ENST00000384337 116 ntBASIC2.25□□□□□ -2.05
RETP07949 AF228730.1-201ENST00000397972 663 ntBASIC2.25□□□□□ -2.05
RETP07949 SNORA11.4-201ENST00000408823 129 ntBASIC2.25□□□□□ -2.05
RETP07949 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.25□□□□□ -2.05
RETP07949 HMGN2P38-201ENST00000423806 265 ntBASIC2.25□□□□□ -2.05
RETP07949 MTND4P20-201ENST00000424125 869 ntBASIC2.25□□□□□ -2.05
RETP07949 AL445669.1-201ENST00000426743 755 ntBASIC2.25□□□□□ -2.05
RETP07949 AL590383.1-201ENST00000428602 75 ntBASIC2.25□□□□□ -2.05
RETP07949 RPS6P15-201ENST00000431996 751 ntBASIC2.25□□□□□ -2.05
RETP07949 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.25□□□□□ -2.05
RETP07949 UBE2FP3-201ENST00000436366 524 ntBASIC2.25□□□□□ -2.05
RETP07949 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.25□□□□□ -2.05
RETP07949 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.25□□□□□ -2.05
RETP07949 BNIP3P2-201ENST00000441221 577 ntBASIC2.25□□□□□ -2.05
RETP07949 PIGFP3-201ENST00000441918 722 ntBASIC2.25□□□□□ -2.05
RETP07949 TPT1P14-201ENST00000448018 505 ntBASIC2.25□□□□□ -2.05
RETP07949 AP000542.1-201ENST00000448473 371 ntBASIC2.25□□□□□ -2.05
RETP07949 RN7SKP210-201ENST00000459176 261 ntBASIC2.25□□□□□ -2.05
RETP07949 RPS15AP36-201ENST00000492022 382 ntBASIC2.25□□□□□ -2.05
RETP07949 MRPS33P3-201ENST00000513456 322 ntBASIC2.25□□□□□ -2.05
RETP07949 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.25□□□□□ -2.05
RETP07949 AC008015.1-201ENST00000555505 465 ntBASIC2.25□□□□□ -2.05
RETP07949 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms