Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VTNP04004 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
VTNP04004 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
VTNP04004 AL445529.1-201ENST00000398713 389 ntBASIC2.86□□□□□ -1.95
VTNP04004 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VTNP04004 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VTNP04004 RAC1P6-201ENST00000423911 575 ntBASIC2.86□□□□□ -1.95
VTNP04004 AL590383.1-201ENST00000428602 75 ntBASIC2.86□□□□□ -1.95
VTNP04004 MYL8P-204ENST00000431574 518 ntBASIC2.86□□□□□ -1.95
VTNP04004 MTCYBP1-201ENST00000454315 1119 ntBASIC2.86□□□□□ -1.95
VTNP04004 SNORD97-201ENST00000459187 142 ntBASIC2.86□□□□□ -1.95
VTNP04004 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.86□□□□□ -1.95
VTNP04004 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.86□□□□□ -1.95
VTNP04004 AC023194.1-201ENST00000493084 308 ntBASIC2.86□□□□□ -1.95
VTNP04004 RPL30P5-201ENST00000494923 336 ntBASIC2.86□□□□□ -1.95
VTNP04004 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.86□□□□□ -1.95
VTNP04004 SCARNA15.2-201ENST00000516409 127 ntBASIC2.86□□□□□ -1.95
VTNP04004 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.86□□□□□ -1.95
VTNP04004 AC100870.1-201ENST00000522035 505 ntBASIC2.86□□□□□ -1.95
VTNP04004 FAM92A1P1-201ENST00000528023 890 ntBASIC2.86□□□□□ -1.95
VTNP04004 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.86□□□□□ -1.95
VTNP04004 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.86□□□□□ -1.95
VTNP04004 MIR4435-1-201ENST00000582552 80 ntBASIC2.86□□□□□ -1.95
VTNP04004 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.86□□□□□ -1.95
VTNP04004 AC013412.1-201ENST00000610687 192 ntBASIC2.86□□□□□ -1.95
VTNP04004 AC013562.2-201ENST00000611632 603 ntBASIC2.86□□□□□ -1.95
VTNP04004 AC087241.4-201ENST00000612441 480 ntBASIC2.86□□□□□ -1.95
VTNP04004 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.86□□□□□ -1.95
VTNP04004 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VTNP04004 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.86□□□□□ -1.95
VTNP04004 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.86□□□□□ -1.95
VTNP04004 MIR6863-201ENST00000636112 90 ntBASIC2.86□□□□□ -1.95
VTNP04004 AC099654.12-201ENST00000639868 649 ntBASIC2.86□□□□□ -1.95
VTNP04004 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.86□□□□□ -1.95
VTNP04004 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
VTNP04004 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VTNP04004 TPTE2P4-201ENST00000258589 1605 ntBASIC2.86□□□□□ -1.95
VTNP04004 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
VTNP04004 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.85□□□□□ -1.95
VTNP04004 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VTNP04004 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VTNP04004 SNORA14A-201ENST00000364773 135 ntBASIC2.85□□□□□ -1.95
VTNP04004 RNU5E-6P-201ENST00000365574 115 ntBASIC2.85□□□□□ -1.95
VTNP04004 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VTNP04004 MIR181B1-201ENST00000385240 110 ntBASIC2.85□□□□□ -1.95
VTNP04004 RNU6-192P-201ENST00000391253 100 ntBASIC2.85□□□□□ -1.95
VTNP04004 AC007919.1-201ENST00000429380 217 ntBASIC2.85□□□□□ -1.95
VTNP04004 AC073464.1-201ENST00000429823 534 ntBASIC2.85□□□□□ -1.95
VTNP04004 MTCO2P11-201ENST00000431069 680 ntBASIC2.85□□□□□ -1.95
VTNP04004 GPR143P-201ENST00000434155 205 ntBASIC2.85□□□□□ -1.95
VTNP04004 TAAR7P-201ENST00000436141 242 ntBASIC2.85□□□□□ -1.95
VTNP04004 MTND1P34-201ENST00000438556 671 ntBASIC2.85□□□□□ -1.95
VTNP04004 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.85□□□□□ -1.95
VTNP04004 AC009237.8-201ENST00000445492 379 ntBASIC2.85□□□□□ -1.95
VTNP04004 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.85□□□□□ -1.95
VTNP04004 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.85□□□□□ -1.95
VTNP04004 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.85□□□□□ -1.95
VTNP04004 RPL9P6-201ENST00000492764 598 ntBASIC2.85□□□□□ -1.95
VTNP04004 RNA5SP320-201ENST00000516263 124 ntBASIC2.85□□□□□ -1.95
VTNP04004 RPL7P20-201ENST00000520308 745 ntBASIC2.85□□□□□ -1.95
VTNP04004 IGHV3-76-201ENST00000522465 295 ntBASIC2.85□□□□□ -1.95
VTNP04004 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.85□□□□□ -1.95
VTNP04004 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.85□□□□□ -1.95
VTNP04004 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.85□□□□□ -1.95
VTNP04004 AC243972.3-201ENST00000539655 198 ntBASIC2.85□□□□□ -1.95
VTNP04004 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.85□□□□□ -1.95
VTNP04004 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.85□□□□□ -1.95
VTNP04004 MIR4506-201ENST00000584693 77 ntBASIC2.85□□□□□ -1.95
VTNP04004 AC136475.10-201ENST00000620253 385 ntBASIC2.85□□□□□ -1.95
VTNP04004 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.85□□□□□ -1.95
VTNP04004 SNORA50A-202ENST00000629536 136 ntBASIC2.85□□□□□ -1.95
VTNP04004 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.85□□□□□ -1.95
VTNP04004 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.85□□□□□ -1.95
VTNP04004 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.85□□□□□ -1.95
VTNP04004 AC110774.1-201ENST00000623567 2018 ntBASIC2.85□□□□□ -1.95
VTNP04004 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
VTNP04004 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.84□□□□□ -1.95
VTNP04004 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.84□□□□□ -1.95
VTNP04004 MTND5P29-201ENST00000458676 1807 ntBASIC2.84□□□□□ -1.95
VTNP04004 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VTNP04004 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.84□□□□□ -1.95
VTNP04004 AL079305.1-201ENST00000623159 3008 ntBASIC2.84□□□□□ -1.95
VTNP04004 HSPE1P11-201ENST00000339579 310 ntBASIC2.84□□□□□ -1.95
VTNP04004 RNU6-288P-201ENST00000363690 104 ntBASIC2.84□□□□□ -1.95
VTNP04004 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.84□□□□□ -1.95
VTNP04004 RNU2-9P-201ENST00000410194 145 ntBASIC2.84□□□□□ -1.95
VTNP04004 RNU4-55P-201ENST00000410731 137 ntBASIC2.84□□□□□ -1.95
VTNP04004 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.84□□□□□ -1.95
VTNP04004 AF274854.1-201ENST00000413236 615 ntBASIC2.84□□□□□ -1.95
VTNP04004 USP9YP20-201ENST00000419224 558 ntBASIC2.84□□□□□ -1.95
VTNP04004 ZNF885P-201ENST00000420174 1098 ntBASIC2.84□□□□□ -1.95
VTNP04004 HSPE1P1-201ENST00000421494 318 ntBASIC2.84□□□□□ -1.95
VTNP04004 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.84□□□□□ -1.95
VTNP04004 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.84□□□□□ -1.95
VTNP04004 AC002486.1-201ENST00000435098 391 ntBASIC2.84□□□□□ -1.95
VTNP04004 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.84□□□□□ -1.95
VTNP04004 NEFMP1-201ENST00000443423 1006 ntBASIC2.84□□□□□ -1.95
VTNP04004 MTND1P1-201ENST00000445453 368 ntBASIC2.84□□□□□ -1.95
VTNP04004 AC132479.1-201ENST00000449160 144 ntBASIC2.84□□□□□ -1.95
VTNP04004 FABP5P13-201ENST00000452144 328 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms