Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.15□□□□□ -2.07
CTDNEP1O95476 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.14□□□□□ -2.07
CTDNEP1O95476 SNORD48-201ENST00000364953 64 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 MIR19A-201ENST00000384878 82 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 AL513331.1-201ENST00000411908 397 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 RPL23AP39-201ENST00000415533 405 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.14□□□□□ -2.07
CTDNEP1O95476 USP9YP26-201ENST00000421008 661 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 HMGN2P38-201ENST00000423806 265 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.14□□□□□ -2.07
CTDNEP1O95476 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.14□□□□□ -2.07
CTDNEP1O95476 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.14□□□□□ -2.07
CTDNEP1O95476 RNU7-26P-201ENST00000458980 63 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.14□□□□□ -2.07
CTDNEP1O95476 AC005178.1-201ENST00000508392 440 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.14□□□□□ -2.07
CTDNEP1O95476 SNORA31.18-201ENST00000517043 134 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.14□□□□□ -2.07
CTDNEP1O95476 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
CTDNEP1O95476 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.14□□□□□ -2.07
CTDNEP1O95476 MTND3P12-201ENST00000559068 328 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.14□□□□□ -2.07
CTDNEP1O95476 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.14□□□□□ -2.07
CTDNEP1O95476 AC068135.2-201ENST00000569293 1028 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.14□□□□□ -2.07
CTDNEP1O95476 AP001004.1-201ENST00000582468 324 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.14□□□□□ -2.07
CTDNEP1O95476 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.14□□□□□ -2.07
CTDNEP1O95476 AC091965.4-201ENST00000607691 587 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CTDNEP1O95476 AC245884.12-201ENST00000615364 59 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 AC079248.2-201ENST00000623779 326 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 AC112204.3-201ENST00000623822 332 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 AP003399.1-201ENST00000637534 361 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CTDNEP1O95476 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CTDNEP1O95476 AC092125.1-201ENST00000562568 1995 ntBASIC2.14□□□□□ -2.07
CTDNEP1O95476 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CTDNEP1O95476 AL137003.2-201ENST00000606924 2538 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 SNORA16.1-201ENST00000364597 132 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 SNORA23-201ENST00000365128 182 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CTDNEP1O95476 SNORA70B-201ENST00000384210 135 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 RNU6-754P-201ENST00000391166 107 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 RNU4-72P-201ENST00000410754 173 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 RNU6-516P-201ENST00000411381 104 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 SPA17P1-201ENST00000416656 452 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 NDUFB4P7-201ENST00000423198 363 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 AC098614.2-201ENST00000426040 255 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 MTND5P25-201ENST00000430499 799 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 UBE2V1P13-201ENST00000436983 439 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.13□□□□□ -2.07
CTDNEP1O95476 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.13□□□□□ -2.07
CTDNEP1O95476 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 MTCO1P42-201ENST00000457379 726 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.13□□□□□ -2.07
CTDNEP1O95476 UBL5P3-201ENST00000475112 231 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 AL049874.1-201ENST00000489560 388 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 AC055855.1-201ENST00000489563 579 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CTDNEP1O95476 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.13□□□□□ -2.07
CTDNEP1O95476 RNU6-678P-201ENST00000516832 109 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 AC026407.1-201ENST00000518369 204 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.13□□□□□ -2.07
CTDNEP1O95476 AC068587.4-201ENST00000533893 186 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.13□□□□□ -2.07
CTDNEP1O95476 AC145350.1-201ENST00000567426 208 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.13□□□□□ -2.07
CTDNEP1O95476 RPS15AP11-201ENST00000594193 385 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 WISP1-OT1-201ENST00000602893 642 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 AC013553.2-201ENST00000604244 589 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 AC103710.2-201ENST00000609912 942 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 HMGB1P24-202ENST00000615653 685 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 AC104010.1-201ENST00000616889 150 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 AC091304.6-201ENST00000619761 202 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 AC019226.1-201ENST00000625666 515 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
CTDNEP1O95476 OR4G2P-202ENST00000641004 1759 ntBASIC2.13□□□□□ -2.07
CTDNEP1O95476 AL138713.1-201ENST00000624026 2130 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.12□□□□□ -2.07
CTDNEP1O95476 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CTDNEP1O95476 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 Y_RNA.169-201ENST00000363745 96 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 RNU6-553P-201ENST00000364047 96 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 MIR514A1-201ENST00000385133 98 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 U8.14-201ENST00000390843 143 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.12□□□□□ -2.07
CTDNEP1O95476 TPMTP3-201ENST00000411928 735 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 AC018630.2-202ENST00000422992 927 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.12□□□□□ -2.07
CTDNEP1O95476 SRIP2-201ENST00000428470 166 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 AL512844.2-201ENST00000433990 593 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 IFNA11P-201ENST00000446352 526 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 COX6CP12-201ENST00000446748 202 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.12□□□□□ -2.07
CTDNEP1O95476 ZNF114P1-201ENST00000453500 292 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.12□□□□□ -2.07
CTDNEP1O95476 MTCO2P6-201ENST00000463134 685 ntBASIC2.12□□□□□ -2.07
CTDNEP1O95476 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.12□□□□□ -2.07
CTDNEP1O95476 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms