Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF40O75150 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF40O75150 EEF1B2P7-201ENST00000451177 676 ntBASIC5.6□□□□□ -1.51
RNF40O75150 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF40O75150 AL389915.2-201ENST00000454576 441 ntBASIC5.6□□□□□ -1.51
RNF40O75150 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF40O75150 Y_RNA.637-201ENST00000459424 114 ntBASIC5.6□□□□□ -1.51
RNF40O75150 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF40O75150 RNU6-941P-201ENST00000516346 108 ntBASIC5.6□□□□□ -1.51
RNF40O75150 SNORA31.19-201ENST00000517079 126 ntBASIC5.6□□□□□ -1.51
RNF40O75150 HMGB1P40-201ENST00000525121 540 ntBASIC5.6□□□□□ -1.51
RNF40O75150 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF40O75150 MIR4646-201ENST00000580775 63 ntBASIC5.6□□□□□ -1.51
RNF40O75150 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
RNF40O75150 AC241585.2-209ENST00000638217 143 ntBASIC5.6□□□□□ -1.51
RNF40O75150 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF40O75150 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF40O75150 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF40O75150 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF40O75150 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF40O75150 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF40O75150 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF40O75150 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF40O75150 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF40O75150 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RNF40O75150 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
RNF40O75150 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF40O75150 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF40O75150 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF40O75150 PHKBP1-201ENST00000450951 1951 ntBASIC5.59□□□□□ -1.51
RNF40O75150 AL353796.1-201ENST00000561542 3241 ntBASIC5.59□□□□□ -1.51
RNF40O75150 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF40O75150 RNA5SP305-201ENST00000362665 119 ntBASIC5.59□□□□□ -1.51
RNF40O75150 Y_RNA.525-201ENST00000384570 113 ntBASIC5.59□□□□□ -1.51
RNF40O75150 RPL17P36-201ENST00000420302 549 ntBASIC5.59□□□□□ -1.51
RNF40O75150 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF40O75150 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF40O75150 AC091874.1-201ENST00000511402 339 ntBASIC5.59□□□□□ -1.51
RNF40O75150 RN7SKP66-201ENST00000516681 231 ntBASIC5.59□□□□□ -1.51
RNF40O75150 BNIP3P1-201ENST00000547295 580 ntBASIC5.59□□□□□ -1.51
RNF40O75150 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF40O75150 AC002545.1-201ENST00000592511 181 ntBASIC5.59□□□□□ -1.51
RNF40O75150 AC006116.3-201ENST00000592968 361 ntBASIC5.59□□□□□ -1.51
RNF40O75150 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF40O75150 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF40O75150 AC074140.1-201ENST00000621617 208 ntBASIC5.59□□□□□ -1.51
RNF40O75150 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF40O75150 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF40O75150 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF40O75150 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
RNF40O75150 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.59□□□□□ -1.52
RNF40O75150 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RNF40O75150 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF40O75150 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF40O75150 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF40O75150 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF40O75150 MTND5P32-201ENST00000560711 1802 ntBASIC5.58□□□□□ -1.52
RNF40O75150 AC018529.3-201ENST00000624212 2254 ntBASIC5.58□□□□□ -1.52
RNF40O75150 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF40O75150 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF40O75150 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.58□□□□□ -1.52
RNF40O75150 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.58□□□□□ -1.52
RNF40O75150 RNA5SP89-201ENST00000410300 108 ntBASIC5.58□□□□□ -1.52
RNF40O75150 RNU6-1199P-201ENST00000411249 104 ntBASIC5.58□□□□□ -1.52
RNF40O75150 AC007738.1-201ENST00000413892 348 ntBASIC5.58□□□□□ -1.52
RNF40O75150 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF40O75150 AL359073.1-201ENST00000448036 403 ntBASIC5.58□□□□□ -1.52
RNF40O75150 AC073850.1-201ENST00000449243 255 ntBASIC5.58□□□□□ -1.52
RNF40O75150 RNU7-107P-201ENST00000459121 61 ntBASIC5.58□□□□□ -1.52
RNF40O75150 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF40O75150 BX284632.1-201ENST00000478218 541 ntBASIC5.58□□□□□ -1.52
RNF40O75150 AC020593.1-201ENST00000507399 299 ntBASIC5.58□□□□□ -1.52
RNF40O75150 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF40O75150 RN7SKP164-201ENST00000516138 266 ntBASIC5.58□□□□□ -1.52
RNF40O75150 Y_RNA.712-201ENST00000517011 92 ntBASIC5.58□□□□□ -1.52
RNF40O75150 AC021006.3-201ENST00000530771 192 ntBASIC5.58□□□□□ -1.52
RNF40O75150 AC133555.2-201ENST00000550213 292 ntBASIC5.58□□□□□ -1.52
RNF40O75150 AC023043.3-201ENST00000593113 385 ntBASIC5.58□□□□□ -1.52
RNF40O75150 AC109583.2-201ENST00000617367 129 ntBASIC5.58□□□□□ -1.52
RNF40O75150 AC015914.2-201ENST00000618167 288 ntBASIC5.58□□□□□ -1.52
RNF40O75150 MIR6839-201ENST00000620425 113 ntBASIC5.58□□□□□ -1.52
RNF40O75150 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RNF40O75150 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF40O75150 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF40O75150 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.58□□□□□ -1.52
RNF40O75150 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF40O75150 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF40O75150 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF40O75150 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF40O75150 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF40O75150 AC126323.6-202ENST00000568092 3511 ntBASIC5.57□□□□□ -1.52
RNF40O75150 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF40O75150 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF40O75150 AC099654.2-201ENST00000433031 1980 ntBASIC5.57□□□□□ -1.52
RNF40O75150 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF40O75150 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RNF40O75150 Y_RNA.101-201ENST00000363154 102 ntBASIC5.57□□□□□ -1.52
RNF40O75150 RN7SKP103-201ENST00000363848 320 ntBASIC5.57□□□□□ -1.52
RNF40O75150 SNORD115-8-201ENST00000363856 82 ntBASIC5.57□□□□□ -1.52
RNF40O75150 SNORD115-38-201ENST00000365037 82 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms