Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RN7SL329P-201ENST00000467740 299 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 AP000926.1-201ENST00000479573 241 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 RPS29P19-201ENST00000479709 171 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM13O60858 VWA8P1-201ENST00000510889 176 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 NDUFB4P9-201ENST00000511646 388 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 RNU6-1278P-201ENST00000516130 107 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 AC103783.1-201ENST00000520506 373 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM13O60858 DEFB108D-201ENST00000527787 222 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 HIGD1AP5-201ENST00000529959 259 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
TRIM13O60858 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM13O60858 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM13O60858 AC004584.2-201ENST00000570407 410 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM13O60858 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM13O60858 AL158032.1-201ENST00000605401 106 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM13O60858 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM13O60858 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM13O60858 HSPA8P1-201ENST00000425843 1833 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM13O60858 AC026951.1-201ENST00000559530 2459 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 OR56B2P-202ENST00000641377 2453 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
TRIM13O60858 Z73965.1-201ENST00000623412 2297 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
TRIM13O60858 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM13O60858 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM13O60858 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM13O60858 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 RNU1-76P-201ENST00000362903 159 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 RNU6-637P-201ENST00000384050 107 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 MIR628-201ENST00000385229 95 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 RPS6P12-201ENST00000432491 726 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 RPL23AP52-201ENST00000439311 478 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 AC234775.1-201ENST00000454247 670 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM13O60858 AC008958.1-201ENST00000511047 682 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM13O60858 Y_RNA.713-201ENST00000517013 96 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 AC104576.1-201ENST00000524225 88 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.12□□□□□ -1.75
TRIM13O60858 AC025884.1-201ENST00000556034 378 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 MIR4458-201ENST00000578872 75 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM13O60858 MIR4270-201ENST00000581799 70 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM13O60858 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM13O60858 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM13O60858 AL591516.1-201ENST00000611326 274 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM13O60858 SNHG22-203ENST00000617833 660 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 AC140479.6-201ENST00000633535 357 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM13O60858 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM13O60858 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM13O60858 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM13O60858 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TRIM13O60858 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM13O60858 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM13O60858 AC022893.2-201ENST00000564832 3296 ntBASIC4.12□□□□□ -1.75
TRIM13O60858 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM13O60858 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM13O60858 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRIM13O60858 RNU6-263P-201ENST00000363811 107 ntBASIC4.11□□□□□ -1.75
TRIM13O60858 Y_RNA.199-201ENST00000364014 102 ntBASIC4.11□□□□□ -1.75
TRIM13O60858 RNU6-356P-201ENST00000384140 107 ntBASIC4.11□□□□□ -1.75
TRIM13O60858 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRIM13O60858 RNU6-754P-201ENST00000391166 107 ntBASIC4.11□□□□□ -1.75
TRIM13O60858 AC092447.6-201ENST00000414578 210 ntBASIC4.11□□□□□ -1.75
TRIM13O60858 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM13O60858 COX6CP10-201ENST00000416832 224 ntBASIC4.11□□□□□ -1.75
TRIM13O60858 AL356387.2-201ENST00000422272 243 ntBASIC4.11□□□□□ -1.75
TRIM13O60858 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM13O60858 CKS1BP5-201ENST00000434172 273 ntBASIC4.11□□□□□ -1.75
TRIM13O60858 PTMAP6-201ENST00000439110 327 ntBASIC4.11□□□□□ -1.75
TRIM13O60858 GAPDHP27-201ENST00000447427 1020 ntBASIC4.11□□□□□ -1.75
TRIM13O60858 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM13O60858 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM13O60858 AC074198.2-201ENST00000508153 258 ntBASIC4.11□□□□□ -1.75
TRIM13O60858 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM13O60858 RNU6-1338P-201ENST00000516328 91 ntBASIC4.11□□□□□ -1.75
TRIM13O60858 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM13O60858 AC126177.3-201ENST00000551839 688 ntBASIC4.11□□□□□ -1.75
TRIM13O60858 MIR4273-201ENST00000582824 84 ntBASIC4.11□□□□□ -1.75
TRIM13O60858 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM13O60858 AC012119.1-201ENST00000603184 222 ntBASIC4.11□□□□□ -1.75
TRIM13O60858 MARK2P15-201ENST00000432204 2186 ntBASIC4.11□□□□□ -1.75
TRIM13O60858 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM13O60858 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TRIM13O60858 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM13O60858 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM13O60858 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM13O60858 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM13O60858 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM13O60858 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM13O60858 AC018529.3-201ENST00000624212 2254 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms