Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.09□□□□□ -2.07
CLOCKO15516 RNU6-486P-201ENST00000363116 107 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 RNU5A-8P-201ENST00000364102 114 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 RNA5SP138-201ENST00000365098 114 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CLOCKO15516 RNU6-1176P-201ENST00000390955 107 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 RNU6-1242P-201ENST00000391052 103 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 NDUFS5P1-201ENST00000405668 289 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 USP9YP6-201ENST00000413550 854 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.09□□□□□ -2.07
CLOCKO15516 AL135786.1-201ENST00000415892 214 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 Z98742.3-201ENST00000418637 326 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.09□□□□□ -2.07
CLOCKO15516 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.09□□□□□ -2.07
CLOCKO15516 RPS3AP44-201ENST00000425466 790 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.09□□□□□ -2.07
CLOCKO15516 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.09□□□□□ -2.07
CLOCKO15516 UBE2FP3-201ENST00000436366 524 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.09□□□□□ -2.07
CLOCKO15516 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.09□□□□□ -2.07
CLOCKO15516 AC108059.3-201ENST00000456388 214 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 FCF1P6-201ENST00000456841 595 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 KLF3P2-201ENST00000465138 268 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 RPL23AP41-201ENST00000484754 458 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.09□□□□□ -2.07
CLOCKO15516 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.09□□□□□ -2.07
CLOCKO15516 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CLOCKO15516 MIR892C-201ENST00000516410 77 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.09□□□□□ -2.07
CLOCKO15516 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.09□□□□□ -2.07
CLOCKO15516 ROCK1P1-201ENST00000573767 549 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 NRBF2P1-201ENST00000587407 859 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 AC073544.2-201ENST00000601155 540 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 BCRP9-201ENST00000605312 388 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.09□□□□□ -2.07
CLOCKO15516 AL031601.2-202ENST00000622650 282 ntBASIC2.09□□□□□ -2.07
CLOCKO15516 AC131280.1-202ENST00000624067 4211 ntBASIC2.09□□□□□ -2.08
CLOCKO15516 HSPE1P11-201ENST00000339579 310 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 OR56A5-201ENST00000340110 738 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 MIR147B-201ENST00000390185 80 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 RNA5SP425-201ENST00000410336 112 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.08□□□□□ -2.08
CLOCKO15516 PTGES3P4-201ENST00000426243 356 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.08□□□□□ -2.08
CLOCKO15516 AC018634.1-201ENST00000437554 401 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.08□□□□□ -2.08
CLOCKO15516 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.08□□□□□ -2.08
CLOCKO15516 RPL23AP35-201ENST00000451906 501 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 OR6C5P-201ENST00000452388 923 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.08□□□□□ -2.08
CLOCKO15516 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.08□□□□□ -2.08
CLOCKO15516 YWHAEP4-201ENST00000505390 198 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.08□□□□□ -2.08
CLOCKO15516 RNA5SP112-201ENST00000515937 99 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 RNA5SP281-201ENST00000516504 135 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
CLOCKO15516 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.08□□□□□ -2.08
CLOCKO15516 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.08□□□□□ -2.08
CLOCKO15516 AP006587.4-201ENST00000526053 529 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 OR5AQ1P-201ENST00000527596 927 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.08□□□□□ -2.08
CLOCKO15516 AL133241.1-201ENST00000556832 487 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.08□□□□□ -2.08
CLOCKO15516 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.08□□□□□ -2.08
CLOCKO15516 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.08□□□□□ -2.08
CLOCKO15516 AC046143.2-201ENST00000609789 160 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
CLOCKO15516 AC024581.2-201ENST00000619986 252 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.08□□□□□ -2.08
CLOCKO15516 AC012640.5-201ENST00000623897 319 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 AC091965.5-201ENST00000624785 342 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLOCKO15516 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.08□□□□□ -2.08
CLOCKO15516 AC104454.1-201ENST00000421341 1401 ntBASIC2.08□□□□□ -2.08
CLOCKO15516 AC006020.1-201ENST00000420179 1854 ntBASIC2.07□□□□□ -2.08
CLOCKO15516 HSPA8P4-201ENST00000511877 1920 ntBASIC2.07□□□□□ -2.08
CLOCKO15516 RNU6-433P-201ENST00000363216 104 ntBASIC2.07□□□□□ -2.08
CLOCKO15516 RNU6-188P-201ENST00000364207 107 ntBASIC2.07□□□□□ -2.08
CLOCKO15516 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.07□□□□□ -2.08
CLOCKO15516 MIR620-201ENST00000385232 95 ntBASIC2.07□□□□□ -2.08
CLOCKO15516 RNU6-757P-201ENST00000410334 100 ntBASIC2.07□□□□□ -2.08
CLOCKO15516 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.07□□□□□ -2.08
CLOCKO15516 HMGB1P11-201ENST00000413899 637 ntBASIC2.07□□□□□ -2.08
CLOCKO15516 VPS26BP1-201ENST00000417155 755 ntBASIC2.07□□□□□ -2.08
CLOCKO15516 ELOCP9-201ENST00000418624 239 ntBASIC2.07□□□□□ -2.08
CLOCKO15516 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.07□□□□□ -2.08
CLOCKO15516 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.07□□□□□ -2.08
CLOCKO15516 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.07□□□□□ -2.08
CLOCKO15516 LARP1BP3-201ENST00000437229 869 ntBASIC2.07□□□□□ -2.08
CLOCKO15516 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.07□□□□□ -2.08
CLOCKO15516 RPL23AP7-203ENST00000449021 469 ntBASIC2.07□□□□□ -2.08
CLOCKO15516 AP001324.2-201ENST00000461163 319 ntBASIC2.07□□□□□ -2.08
CLOCKO15516 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
CLOCKO15516 AL049829.1-201ENST00000465411 156 ntBASIC2.07□□□□□ -2.08
CLOCKO15516 AC072039.1-201ENST00000477611 581 ntBASIC2.07□□□□□ -2.08
CLOCKO15516 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.07□□□□□ -2.08
CLOCKO15516 AP004247.1-201ENST00000531556 1289 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms